RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 CATSPER2Q96P56 530 aa9.17□□□□□ -0.94
SORL1-213ENST00000534754 C20orf27Q9GZN8 174 aa9.17□□□□□ -0.94
SORL1-213ENST00000534754 SMARCAD1Q9H4L7 1026 aa9.17□□□□□ -0.94
SORL1-213ENST00000534754 SUDS3Q9H7L9 328 aaPredicted RBP9.17□□□□□ -0.94
SORL1-213ENST00000534754 ERAP1Q9NZ08 941 aa9.17□□□□□ -0.94
SORL1-213ENST00000534754 HSFX1Q9UBD0 423 aa9.17□□□□□ -0.94
SORL1-213ENST00000534754 DTNAQ9Y4J8 743 aa9.17□□□□□ -0.94
SORL1-213ENST00000534754 CXorf49A8MYA2 514 aaPredicted RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 DENRO43583 198 aaKnown RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 LRCH4O75427 683 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 PROCP04070 461 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 DESP17661 470 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 PRKCHP24723 683 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 IL1R2P27930 398 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 ACOT2P49753 483 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 CLCN2P51788 898 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 YWHAZP63104 245 aaKnown RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 ROR1Q01973 937 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 TUBB3Q13509 450 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 KCNT1Q5JUK3 1230 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 RABGAP1LQ5R372 815 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 CYP4A22Q5TCH4 519 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 FAM160B1Q5W0V3 765 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 FBXL19Q6PCT2 694 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 DARS2Q6PI48 645 aaKnown RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 C1orf228Q6PIY5 440 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 TAS1R3Q7RTX0 852 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 NDUFAF2Q8N183 169 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 POU5F2Q8N7G0 328 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 KCTD6Q8NC69 237 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 MCPH1Q8NEM0 835 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 PIWIL2Q8TC59 973 aaKnown RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 SPATA18Q8TC71 538 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 IRGQQ8WZA9 623 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 CMTM5Q96DZ9 223 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 APOL6Q9BWW8 343 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 IMPG2Q9BZV3 1241 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 FAM96AQ9H5X1 160 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 DHX33Q9H6R0 707 aaKnown RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 RBAKQ9NYW8 714 aaPredicted RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 PLK2Q9NYY3 685 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 ZC3H7BQ9UGR2 993 aaKnown RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 AGO2Q9UKV8 859 aaKnown RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 POMPQ9Y244 141 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 CCDC160A6NGH7 325 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 CCDC85CA6NKD9 419 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 KPNA6O60684 536 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 SIN3BO75182 1162 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 AVILO75366 819 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 TOM1L1O75674 476 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 OATP04181 439 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 SMIM10L2AP0DMW4 78 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 SMIM10L2BP0DMW5 78 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 HOXC8P31273 242 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 L1CAMP32004 1257 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 RFC1P35251 1148 aaPredicted RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 SCNN1BP51168 640 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 TBL3Q12788 808 aaKnown RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 BMPR2Q13873 1038 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 ACBD5Q5T8D3 534 aaPredicted RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 OGFRL1Q5TC84 451 aaPredicted RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 KLHDC10Q6PID8 442 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 ZCCHC23Q6ZST2 131 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 DENND5BQ6ZUT9 1274 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 TMC7Q7Z402 723 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 ALDH16A1Q8IZ83 802 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 HIPK4Q8NE63 616 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 ATP6V0A1Q93050 837 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 GLT1D1Q96MS3 346 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 PLEKHG4BQ96PX9 1271 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 GCNAQ96QF7 691 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 MRPS26Q9BYN8 205 aaKnown RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 SENP6Q9GZR1 1112 aaPredicted RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 NRDE2Q9H7Z3 1164 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 CYP4F11Q9HBI6 524 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 USP29Q9HBJ7 922 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 TIMMDC1Q9NPL8 285 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 STARD7Q9NQZ5 370 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 C6orf203Q9P0P8 240 aaPredicted RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 PCDH10Q9P2E7 1040 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 ARHGAP28Q9P2N2 729 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
SORL1-213ENST00000534754 DNAJC16Q9Y2G8 782 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 INPP5FQ9Y2H2 1132 aa9.16□□□□□ -0.94
SORL1-213ENST00000534754 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.15□□□□□ -0.94
SORL1-213ENST00000534754 TFAP2AP05549 437 aa9.15□□□□□ -0.94
SORL1-213ENST00000534754 CD48P09326 243 aa9.15□□□□□ -0.94
SORL1-213ENST00000534754 KRT3P12035 628 aa9.15□□□□□ -0.94
SORL1-213ENST00000534754 MYL4P12829 197 aa9.15□□□□□ -0.94
SORL1-213ENST00000534754 INSRRP14616 1297 aa9.15□□□□□ -0.94
SORL1-213ENST00000534754 EIF4BP23588 611 aaKnown RBP9.15□□□□□ -0.94
SORL1-213ENST00000534754 PMLP29590 882 aa9.15□□□□□ -0.94
SORL1-213ENST00000534754 POLR2BP30876 1174 aaKnown RBP9.15□□□□□ -0.94
SORL1-213ENST00000534754 CDH5P33151 784 aaPredicted RBP9.15□□□□□ -0.94
SORL1-213ENST00000534754 MAGEA8P43361 318 aa9.15□□□□□ -0.94
SORL1-213ENST00000534754 ALDH1A3P47895 512 aa9.15□□□□□ -0.94
SORL1-213ENST00000534754 SERPINB9P50453 376 aa9.15□□□□□ -0.94
SORL1-213ENST00000534754 ATN1P54259 1190 aaPredicted RBP9.15□□□□□ -0.94
SORL1-213ENST00000534754 ITGA7Q13683 1181 aa9.15□□□□□ -0.94
SORL1-213ENST00000534754 CYLC2Q14093 348 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms