RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 APBA1Q02410 837 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 FOXC1Q12948 553 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 NNTQ13423 1086 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 TPD52L1Q16890 204 aaPredicted RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 EXOC3L4Q17RC7 722 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 ZC3H12AQ5D1E8 599 aaKnown RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 MS4A13Q5J8X5 152 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 BEND5Q7L4P6 421 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 MFN1Q8IWA4 741 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 CCDC117Q8IWD4 279 aaPredicted RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 CARNMT1Q8N4J0 409 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 HJURPQ8NCD3 748 aaPredicted RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 OR2I1PQ8NGU4 316 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 TRIM62Q9BVG3 475 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 MIR1-1HGQ9H1L0 117 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 THAP9Q9H5L6 903 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 POPDC2Q9HBU9 364 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 PRSS16Q9NQE7 514 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 CHMP5Q9NZZ3 219 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 APEX2Q9UBZ4 518 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 SUN2Q9UH99 717 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 NFE2L3Q9Y4A8 694 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 A0A1B0GTW7 788 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 UPK3BL1B0FP48 263 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 UPK3BL2E5RIL1 263 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 TRUB2O95900 331 aaKnown RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 APOEP02649 317 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 PON1P27169 355 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 MTIF2P46199 727 aaKnown RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 TAF5Q15542 800 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 ST3GAL2Q16842 350 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 DCAF6Q58WW2 860 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 DCAF12L1Q5VU92 463 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 PIP4P1Q86T03 277 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 TAC4Q86UU9 113 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 CFAP52Q8N1V2 620 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 WDTC1Q8N5D0 677 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 SHC3Q92529 594 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 TTC17Q96AE7 1141 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 MYEOVQ96EZ4 313 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 LMLNQ96KR4 655 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 PRICKLE1Q96MT3 831 aaPredicted RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 NUCKS1Q9H1E3 243 aaKnown RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 LHX5Q9H2C1 402 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 DNAAF2Q9NVR5 837 aaKnown RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.24□□□□□ -0.93
COPB1-211ENST00000534234 EIF2B4Q9UI10 523 aaKnown RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 XPO7Q9UIA9 1087 aaKnown RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 INTS6Q9UL03 887 aaKnown RBP9.24□□□□□ -0.93
COPB1-211ENST00000534234 RALGAPA1Q6GYQ0 2036 aa9.24□□□□□ -0.93
COPB1-211ENST00000534234 SPAG17Q6Q759 2223 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 SPAARA0A1B0GVQ0 90 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 GTPBP10A4D1E9 387 aaKnown RBP9.23□□□□□ -0.93
COPB1-211ENST00000534234 H0Y626 953 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 BCAT2O15382 392 aaPredicted RBP9.23□□□□□ -0.93
COPB1-211ENST00000534234 KRT37O76014 449 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 TOP3BO95985 862 aaKnown RBP9.23□□□□□ -0.93
COPB1-211ENST00000534234 DNTTP04053 509 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 C7P10643 843 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 CD59P13987 128 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 SPINK2P20155 84 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 ACSL1P33121 698 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 CSKP41240 450 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 ST8SIA6P61647 398 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 RPS14P62263 151 aaKnown RBP9.23□□□□□ -0.93
COPB1-211ENST00000534234 SIM1P81133 766 aaPredicted RBP9.23□□□□□ -0.93
COPB1-211ENST00000534234 PTK2Q05397 1052 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 ZBTB16Q05516 673 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 SLC14A1Q13336 389 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 PDCLQ13371 301 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 CDH18Q13634 790 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 FSCBQ5H9T9 825 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 EFHC1Q5JVL4 640 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 MMS22LQ6ZRQ5 1243 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 LGI2Q8N0V4 545 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 ZCCHC9Q8N567 271 aaKnown RBP9.23□□□□□ -0.93
COPB1-211ENST00000534234 PPP1R13BQ96KQ4 1090 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 BTN2A3PQ96KV6 586 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 ZDHHC5Q9C0B5 715 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 PCED1AQ9H1Q7 454 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 MTG2Q9H4K7 406 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 FBRSQ9HAH7 460 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 KIAA1522Q9P206 1035 aaPredicted RBP9.23□□□□□ -0.93
COPB1-211ENST00000534234 TJP2Q9UDY2 1190 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 SLC12A6Q9UHW9 1150 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 DNAJC12Q9UKB3 198 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 WASF3Q9UPY6 502 aa9.23□□□□□ -0.93
COPB1-211ENST00000534234 MYH10P35580 1976 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 THADAQ6YHU6 1953 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 KCNU1A8MYU2 1149 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 FOXN3O00409 490 aaPredicted RBP9.22□□□□□ -0.93
COPB1-211ENST00000534234 ACACBO00763 2458 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 SH3BP5O60239 455 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 GJB3O75712 270 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 LUC7L3O95232 432 aaKnown RBP9.22□□□□□ -0.93
COPB1-211ENST00000534234 MOCS3O95396 460 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 IGLV3-25P01717 112 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 ASLP04424 464 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 GLI1P08151 1106 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 TACR2P21452 398 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms