RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 OLA1Q9NTK5 396 aaKnown RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 SERGEFQ9UGK8 458 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 SLCO3A1Q9UIG8 710 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 GGA2Q9UJY4 613 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 NOCTQ9UK39 431 aaKnown RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 CDV3Q9UKY7 258 aaKnown RBP10□□□□□ -0.81
SSBP3-215ENST00000533946 PCDHGC3Q9UN70 934 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 ZNF510Q9Y2H8 683 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 SIK3Q9Y2K2 1263 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 ZFHX4Q86UP3 3567 aa10□□□□□ -0.81
SSBP3-215ENST00000533946 MAP1BP46821 2468 aaKnown RBP9.99□□□□□ -0.81
SSBP3-215ENST00000533946 DMXL2Q8TDJ6 3036 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 EPG5Q9HCE0 2579 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 TTC34A8MYJ7 566 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 KCNU1A8MYU2 1149 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 TEX33O43247 280 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 MAP3K13O43283 966 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 CNTN5O94779 1100 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 GFPT2O94808 682 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 FBXO21O94952 628 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 EPHX1P07099 455 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 PABPC1P11940 636 aaKnown RBP9.99□□□□□ -0.81
SSBP3-215ENST00000533946 CYP11B1P15538 503 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 TACR2P21452 398 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 CSKP41240 450 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 COPB1P53618 953 aaKnown RBP9.99□□□□□ -0.81
SSBP3-215ENST00000533946 YWHAZP63104 245 aaKnown RBP9.99□□□□□ -0.81
SSBP3-215ENST00000533946 BNC1Q01954 994 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 RPL6Q02878 288 aaKnown RBP9.99□□□□□ -0.81
SSBP3-215ENST00000533946 STILQ15468 1287 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 LAYNQ6UX15 382 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 XYLT1Q86Y38 959 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 TMPRSS6Q8IU80 811 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 SLC30A5Q8TAD4 765 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 ENOX1Q8TC92 643 aaKnown RBP9.99□□□□□ -0.81
SSBP3-215ENST00000533946 STK32AQ8WU08 396 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 EXOC4Q96A65 974 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 LOXL4Q96JB6 756 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 RPL10LQ96L21 214 aaKnown RBP9.99□□□□□ -0.81
SSBP3-215ENST00000533946 CDK5RAP1Q96SZ6 601 aaKnown RBP9.99□□□□□ -0.81
SSBP3-215ENST00000533946 PRSS16Q9NQE7 514 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 FAM207AQ9NSI2 230 aaPredicted RBP9.99□□□□□ -0.81
SSBP3-215ENST00000533946 PIGVQ9NUD9 493 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 PILRBQ9UKJ0 227 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 TLR6Q9Y2C9 796 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 ACTL7AQ9Y615 435 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 NYNRINQ9P2P1 1898 aaKnown RBP9.99□□□□□ -0.81
SSBP3-215ENST00000533946 CELSR3Q9NYQ7 3312 aa9.99□□□□□ -0.81
SSBP3-215ENST00000533946 ACACBO00763 2458 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 F8VZ95 297 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 GOLGA8SH3BPF8 625 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 LRP3O75074 770 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 ALDH1A2O94788 518 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 RHOBTB1O94844 696 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 ZNF18P17022 549 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 ACSL1P33121 698 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 FLT3P36888 993 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 MAPK8P45983 427 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 TPMTP51580 245 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 JAM2P57087 298 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 POLR2FP61218 127 aaKnown RBP9.98□□□□□ -0.81
SSBP3-215ENST00000533946 FAM193AP78312 1265 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 FMO1Q01740 532 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 RING1Q06587 406 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 NME3Q13232 169 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 SYCP1Q15431 976 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 ELF2Q15723 593 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 PPM1JQ5JR12 505 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 KCNT1Q5JUK3 1230 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 NAA35Q5VZE5 725 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 CXorf57Q6NSI4 855 aaKnown RBP9.98□□□□□ -0.81
SSBP3-215ENST00000533946 FBXL22Q6P050 247 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 ENOSF1Q7L5Y1 443 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 CYP2U1Q7Z449 544 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 EMC1Q8N766 993 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.98□□□□□ -0.819e-7■■■■□ 22.4
SSBP3-215ENST00000533946 KCNV2Q8TDN2 545 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 ALG14Q96F25 216 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 TOE1Q96GM8 510 aaKnown RBP9.98□□□□□ -0.81
SSBP3-215ENST00000533946 HSPA12BQ96MM6 686 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 TBCBQ99426 244 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 EDEM2Q9BV94 578 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 GPR174Q9BXC1 333 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 DNAI2Q9GZS0 605 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 LHX5Q9H2C1 402 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 FAM204AQ9H8W3 233 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 PRDM16Q9HAZ2 1276 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 POPDC2Q9HBU9 364 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 VPS45Q9NRW7 570 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 DDIT4Q9NX09 232 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 HS3ST4Q9Y661 456 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 PLXNA2O75051 1894 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 TMEM131Q92545 1883 aa9.98□□□□□ -0.81
SSBP3-215ENST00000533946 USP24Q9UPU5 2620 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 PRR5-ARHGAP8B1AHC4 643 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 CAPN9O14815 690 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 WNT9AO14904 365 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 MED7O43513 233 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 SIN3BO75182 1162 aa9.97□□□□□ -0.81
SSBP3-215ENST00000533946 PAGE1O75459 146 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms