RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 H3BRJ5 948 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 NDC80O14777 642 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 IGHA1P01876 353 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 APOEP02649 317 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 RHOP08100 348 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 MYL4P12829 197 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 IL1R2P27930 398 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 CDC25CP30307 473 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 TUBP50607 506 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 USP46P62068 366 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 DR1Q01658 176 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 TAF10Q12962 218 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 PPP2R5DQ14738 602 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 CCNG2Q16589 344 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 CYP1B1Q16678 543 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 PPP6R3Q5H9R7 873 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 SYPL2Q5VXT5 272 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 KAZNQ674X7 775 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 MSANTD2Q6P1R3 559 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 MFSD7Q6UXD7 560 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 SYDE1Q6ZW31 735 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 BHLHA9Q7RTU4 235 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 FAM131BQ86XD5 332 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 CPNE8Q86YQ8 564 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 KLHL7Q8IXQ5 586 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 CCDC105Q8IYK2 499 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 ZNF276Q8N554 614 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 RAPGEF5Q92565 580 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 NDRG1Q92597 394 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 HAUS1Q96CS2 278 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 KRT12Q99456 494 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 SNRNP25Q9BV90 132 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 DHX35Q9H5Z1 703 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 LRRC19Q9H756 370 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 WDR6Q9NNW5 1121 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 HCFC1R1Q9NWW0 138 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 COX16Q9P0S2 106 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 GMIPQ9P107 970 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 STIM2Q9P246 746 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 TLR6Q9Y2C9 796 aa11.32□□□□□ -0.6
CCDC90B-218ENST00000533761 PI4K2BG5E9Z4 385 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 IRAK2O43187 625 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 FYNP06241 537 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 RARGP13631 454 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 TCF4P15884 667 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 TGM2P21980 687 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 GABRR2P28476 465 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 CXCR3P49682 368 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 KLF1Q13351 362 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 SMAD4Q13485 552 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 CBX2Q14781 532 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 ELF2Q15723 593 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 TAZQ16635 292 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 SH3PXD2AQ5TCZ1 1133 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 SNX30Q5VWJ9 437 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 KLHDC10Q6PID8 442 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 CCDC137Q6PK04 289 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 HFE2Q6ZVN8 426 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 BBS12Q6ZW61 710 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 RFX6Q8HWS3 928 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 TMC8Q8IU68 726 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 IFT20Q8IY31 132 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 NOA1Q8NC60 698 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 P3H4Q92791 437 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 HEMGNQ9BXL5 484 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 LRRC3Q9BY71 257 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 ATXN3LQ9H3M9 355 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 PIGVQ9NUD9 493 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 KLHL11Q9NVR0 708 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 PCYOX1Q9UHG3 505 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 ZMYM5Q9UJ78 669 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 FZD10Q9ULW2 581 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 FAM50BQ9Y247 325 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 GREB1Q4ZG55 1949 aa11.31□□□□□ -0.6
CCDC90B-218ENST00000533761 PRUNE2Q8WUY3 3088 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 MYO16Q9Y6X6 1858 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 SOBPA7XYQ1 873 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 APOC4-APOC2K7ER74 178 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 APOL1O14791 398 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 MCF2LO15068 1137 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 DAPK3O43293 454 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 CST8O60676 142 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 ECEL1O95672 775 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 IGLV3-25P01717 112 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 APOC2P02655 101 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 F11P03951 625 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 RHOXF2BP0C7M4 288 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 FSHRP23945 695 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 ADRA1BP35368 520 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 NR2C2P49116 596 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 DPYSL3Q14195 570 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 AAK1Q2M2I8 961 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 LEXMQ3ZCV2 418 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 ATP13A4Q4VNC1 1196 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 C10orf120Q5SQS8 335 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 HECTD3Q5T447 861 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 NUGGCQ68CJ6 796 aa11.3□□□□□ -0.6
CCDC90B-218ENST00000533761 DRICH1Q6PGQ1 229 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms