RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 PIK3C2AO00443 1686 aa17.97■□□□□ 0.47
PHRF1-205ENST00000533464 TTLL13PA6NNM8 815 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 SMIM10L2AP0DMW4 78 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 SMIM10L2BP0DMW5 78 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 HSDL1Q3SXM5 330 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 DEFB107AQ8IZN7 70 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 CAAP1Q9H8G2 361 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 YDJCA8MPS7 323 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 HNRNPCL2B2RXH8 293 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 UBDO15205 165 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 FARP2O94887 1054 aaPredicted RBP17.96■□□□□ 0.47
PHRF1-205ENST00000533464 BBS12Q6ZW61 710 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 PGBD3Q8N328 593 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 ART4Q93070 314 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 OTULINQ96BN8 352 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 OXNAD1Q96HP4 312 aaPredicted RBP17.96■□□□□ 0.47
PHRF1-205ENST00000533464 ARMCX1Q9P291 453 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 A0A0B4J269 797 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 CHKAP35790 457 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 C12orf29Q8N999 325 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 INPP5DQ92835 1189 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 SNX13Q9Y5W8 968 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 A0A0A0MRY4 1105 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 CHADO15335 359 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 WLSQ5T9L3 541 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 SPATA13Q96N96 652 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 ZNF556Q9HAH1 456 aa17.96■□□□□ 0.47
PHRF1-205ENST00000533464 NR5A2O00482 541 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 CBX6O95503 412 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 ERVK-10P10266 1014 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 TMC7Q7Z402 723 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 SLC22A9Q8IVM8 553 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 CXorf56Q9H5V9 222 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 hCG_1818297A0A087WSY0 165 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 PQBP1O60828 265 aaKnown RBP17.95■□□□□ 0.46
PHRF1-205ENST00000533464 PSMB4P28070 264 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 CRADDP78560 199 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 LLGL2Q6P1M3 1020 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 TMPRSS6Q8IU80 811 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 ANKRD52Q8NB46 1076 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 TSPAN3O60637 253 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 NFYCQ13952 458 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 HIST2H2ACQ16777 129 aaPredicted RBP17.95■□□□□ 0.46
PHRF1-205ENST00000533464 HIST2H2AA3Q6FI13 130 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 RETSATQ6NUM9 610 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 HERC6Q8IVU3 1022 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 NKX2-3Q8TAU0 364 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 CNBD2Q96M20 576 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 FHDC1Q9C0D6 1143 aaPredicted RBP17.95■□□□□ 0.46
PHRF1-205ENST00000533464 MON2Q7Z3U7 1717 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 hCG_2014768A0A024R1R8 64 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 ATP6V1G2O95670 118 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 HOXC6P09630 235 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 SOAT1P35610 550 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 ABCG1P45844 678 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 C16orf46Q6P387 395 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 B3GALNT2Q8NCR0 500 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 TNIP2Q8NFZ5 429 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 CATSPER2Q96P56 530 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 NRDE2Q9H7Z3 1164 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 PNMA8BQ9ULN7 279 aaPredicted RBP17.95■□□□□ 0.46
PHRF1-205ENST00000533464 CLCA2Q9UQC9 943 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 ZMYM2Q9UBW7 1377 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 PIAS1O75925 651 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 ALBP02768 609 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 ITGAVP06756 1048 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 ZC3H12BQ5HYM0 836 aaKnown RBP17.95■□□□□ 0.46
PHRF1-205ENST00000533464 POLNQ7Z5Q5 900 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 POU5F2Q8N7G0 328 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 CKAP2Q8WWK9 683 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 TBL1YQ9BQ87 522 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 RGS18Q9NS28 235 aa17.95■□□□□ 0.46
PHRF1-205ENST00000533464 TBL3Q12788 808 aaKnown RBP17.94■□□□□ 0.46
PHRF1-205ENST00000533464 PATL1Q86TB9 770 aaKnown RBP17.94■□□□□ 0.46
PHRF1-205ENST00000533464 HORMAD1Q86X24 394 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 CDK5RAP1Q96SZ6 601 aaKnown RBP17.94■□□□□ 0.46
PHRF1-205ENST00000533464 ARF4P18085 180 aaPredicted RBP17.94■□□□□ 0.46
PHRF1-205ENST00000533464 CDK16Q00536 496 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 TRMT5Q32P41 509 aaKnown RBP17.94■□□□□ 0.46
PHRF1-205ENST00000533464 ZC3H12AQ5D1E8 599 aaKnown RBP17.94■□□□□ 0.46
PHRF1-205ENST00000533464 LGI2Q8N0V4 545 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 KYQ8NBH2 561 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 OR52K1Q8NGK4 314 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 BSNDQ8WZ55 320 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 ZBTB10Q96DT7 871 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 ALADP13716 330 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 CRABP2P29373 138 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 ZNF135P52742 658 aaPredicted RBP17.94■□□□□ 0.46
PHRF1-205ENST00000533464 MAP3K10Q02779 954 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 GPR142Q7Z601 462 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 CIPCQ9C0C6 399 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 MYLK2Q9H1R3 596 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 SLC25A13Q9UJS0 675 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 NID2Q14112 1375 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 IGLV3-22A0A075B6J6 115 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 LZTS3O60299 673 aaPredicted RBP17.94■□□□□ 0.46
PHRF1-205ENST00000533464 BANF1O75531 89 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 PGK1P00558 417 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 NUDT17P0C025 328 aa17.94■□□□□ 0.46
PHRF1-205ENST00000533464 WEE1P30291 646 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms