RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 EGFLAMQ63HQ2 1017 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 DNAJC24Q6P3W2 148 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 FAM217AQ8IXS0 508 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 CFAP52Q8N1V2 620 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 IL17RCQ8NAC3 791 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 HMGB4Q8WW32 186 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 SLC39A13Q96H72 371 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 CFAP57Q96MR6 1250 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 PRICKLE1Q96MT3 831 aaPredicted RBP11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 HAUS4Q9H6D7 363 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 ABCB8Q9NUT2 735 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 RRN3Q9NYV6 651 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 RAB23Q9ULC3 237 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 CLEC4EQ9ULY5 219 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 MMP17Q9ULZ9 603 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 LUC7L2Q9Y383 392 aaKnown RBP11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 SDK1Q7Z5N4 2213 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 ZFHX2Q9C0A1 2572 aaPredicted RBP11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
UBASH3B-208ENST00000533451 SPAG17Q6Q759 2223 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 TCRBV21S2A2A0A5A6 115 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 H0Y626 953 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 K7ESF4 209 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 SGK1O00141 431 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 ALDH1A2O94788 518 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 TPM1P09493 284 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 KRT3P12035 628 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 UNGP13051 313 aaPredicted RBP11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 PDGFRAP16234 1089 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 DESP17661 470 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 TFE3P19532 575 aaPredicted RBP11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 GGCXP38435 758 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 KIR2DL1P43626 348 aaPredicted RBP11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 NUMBP49757 651 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 SRSF5Q13243 272 aaKnown RBP11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 GEN1Q17RS7 908 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 SLC25A52Q3SY17 297 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 FNDC3BQ53EP0 1204 aaKnown RBP11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 MS4A13Q5J8X5 152 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 RABGAP1LQ5R372 815 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 DCUN1D2Q6PH85 259 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 CHST9Q7L1S5 443 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 IRF2BP2Q7Z5L9 587 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 VPS36Q86VN1 386 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 LONP2Q86WA8 852 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 CIR1Q86X95 450 aaPredicted RBP11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 PHF13Q86YI8 300 aaPredicted RBP11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 AZIN2Q96A70 460 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 P2RY11Q96G91 374 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 RPRD1AQ96P16 312 aaPredicted RBP11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 ACOX2Q99424 681 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 SLC2A11Q9BYW1 496 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 TPSD1Q9BZJ3 242 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 TKTL2Q9H0I9 626 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 WDCPQ9H6R7 721 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 SLC24A3Q9HC58 644 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 POLMQ9NP87 494 aaPredicted RBP11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 PIGVQ9NUD9 493 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 CACNA2D2Q9NY47 1150 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 GGA2Q9UJY4 613 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 STOML2Q9UJZ1 356 aa11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBASH3B-208ENST00000533451 AXIN1O15169 862 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 PAGE1O75459 146 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 PAPSS2O95340 614 aaPredicted RBP11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 F9P00740 461 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 IGLV3-25P01717 112 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 LMNAP02545 664 aaKnown RBP11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 CISD3P0C7P0 127 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 PABPC1P11940 636 aaKnown RBP11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 TDGF1P13385 188 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 NTSR1P30989 418 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 RDXP35241 583 aaKnown RBP11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 ZBED6P86452 979 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 SIM2Q14190 667 aaPredicted RBP11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 STARD3Q14849 445 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 CRY1Q16526 586 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 HSF5Q4G112 596 aaPredicted RBP11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 E4F1Q66K89 784 aaPredicted RBP11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 ACAD10Q6JQN1 1059 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 SERPINA13PQ6UXR4 307 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 FAM131BQ86XD5 332 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 AHI1Q8N157 1196 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 CAMKK1Q8N5S9 505 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 ZNF557Q8N988 423 aaPredicted RBP11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 JOSD2Q8TAC2 188 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 RXFP2Q8WXD0 754 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 SORCS1Q8WY21 1168 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 IQCDQ96DY2 449 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 MCEEQ96PE7 176 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 NPY6RQ99463 290 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 ADAM33Q9BZ11 813 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 EDEM3Q9BZQ6 932 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 NCDNQ9UBB6 729 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 VANGL2Q9ULK5 521 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 SMG5Q9UPR3 1016 aaKnown RBP11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 INVSQ9Y283 1065 aa11.86□□□□□ -0.51
UBASH3B-208ENST00000533451 SLC27A6Q9Y2P4 619 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms