RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 SYPL2Q5VXT5 272 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 VSTM1Q6UX27 236 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 BEND5Q7L4P6 421 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 TMPRSS6Q8IU80 811 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 TOP6BLQ8N6T0 577 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 PSMF1Q92530 271 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 RUFY1Q96T51 708 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CCDC86Q9H6F5 360 aaKnown RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 ASAH2Q9NR71 780 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 PLK2Q9NYY3 685 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 FAT3Q8TDW7 4589 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 GOLGA8BA8MQT2 603 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 H0Y626 953 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 J3QKU1 62 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 K7ERQ8 282 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 GAPDHSO14556 408 aaPredicted RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 TRIM16O95361 564 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CKMP06732 381 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CTSBP07858 339 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 RGRP47804 291 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 LSM11P83369 360 aaKnown RBP eCLIP1.82□□□□□ -2.12
KNL1-211ENST00000533001 PDGFRLQ15198 375 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 NFIL3Q16649 462 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 MAPK6Q16659 721 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 SKOR2Q2VWA4 1001 aaPredicted RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 CBWD6Q4V339 395 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CBWD3Q5JTY5 395 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CBWD5Q5RIA9 395 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 AFMIDQ63HM1 303 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 ZNF787Q6DD87 383 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 PMF1Q6P1K2 205 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 IGFL2Q6UWQ7 119 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 MIER3Q7Z3K6 550 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 KLHDC8BQ8IXV7 354 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 APCDD1Q8J025 514 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 C2orf15Q8WU43 125 aaKnown RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 YTHDC1Q96MU7 727 aaKnown RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 SDF4Q9BRK5 362 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 KIF9Q9HAQ2 790 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CLIC5Q9NZA1 410 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 TMEM9Q9P0T7 183 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CHORDC1Q9UHD1 332 aaPredicted RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 EIF2B4Q9UI10 523 aaKnown RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 ATXN7L1Q9ULK2 861 aaPredicted RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 SLC12A7Q9Y666 1083 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 SPTY2D1-AS1A0A0U1RR47 76 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 TRAFD1O14545 582 aaPredicted RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 PLRG1O43660 514 aaKnown RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 ATP9BO43861 1147 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 PRLP01236 227 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CSF2P04141 144 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CLTAP09496 248 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 FAM87AP0C7U9 286 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 FGF3P11487 239 aaPredicted RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 BRAFP15056 766 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 LHCGRP22888 699 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 BDNFP23560 247 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CCKBRP32239 447 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CASRP41180 1078 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 HARS2P49590 506 aaKnown RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 RALGDSQ12967 914 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 ORC2Q13416 577 aaPredicted RBP1.82□□□□□ -2.12
KNL1-211ENST00000533001 IGFBP7Q16270 282 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 CTXN3Q4LDR2 81 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 HES3Q5TGS1 186 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 FAM35AQ86V20 835 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 MYLPFQ96A32 169 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 MED8Q96G25 268 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 TRIM55Q9BYV6 548 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 AGPAT3Q9NRZ7 376 aa1.82□□□□□ -2.12
KNL1-211ENST00000533001 LRRIQ3A6PVS8 624 aaPredicted RBP1.81□□□□□ -2.12
KNL1-211ENST00000533001 K7ESM1 405 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 O00370 1275 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 ARHGAP6O43182 974 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 OPA1O60313 960 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 FZD6O60353 706 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 KLF7O75840 302 aaPredicted RBP1.81□□□□□ -2.12
KNL1-211ENST00000533001 HLA-EP13747 358 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 KIF5BP33176 963 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 NASPP49321 788 aaPredicted RBP1.81□□□□□ -2.12
KNL1-211ENST00000533001 ZNF445P59923 1031 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 PSMD6Q15008 389 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 ARHGAP17Q68EM7 881 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 LCN10Q6JVE6 187 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 ZNF547Q8IVP9 402 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 TP53I13Q8NBR0 393 aaPredicted RBP1.81□□□□□ -2.12
KNL1-211ENST00000533001 PIP4K2CQ8TBX8 421 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 GIPC2Q8TF65 315 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 NKD1Q969G9 470 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 PPP2R3CQ969Q6 453 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 ARRDC3Q96B67 414 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 SMIM14Q96QK8 99 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 SLC26A6Q9BXS9 759 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 KRTAP3-3Q9BYR6 98 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 KRTAP3-2Q9BYR7 98 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 TMPRSS4Q9NRS4 437 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 NRBP2Q9NSY0 501 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 ELOVL2Q9NXB9 296 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 NCDNQ9UBB6 729 aa1.81□□□□□ -2.12
KNL1-211ENST00000533001 TMEM59LQ9UK28 342 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms