RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551	ALG3	Q92685	438 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	C1orf74	Q96LT6	269 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	RPRD1A	Q96P16	312 aa	Predicted RBP	18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	EPAS1	Q99814	870 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	PCDH18	Q9HCL0	1135 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551		E9PAM4	449 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	EEF2K	O00418	725 aa	Known RBP	18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	SLC9A3R1	O14745	358 aa	Predicted RBP	18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	DAPK3	O43293	454 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	ECI2	O75521	394 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	GOT1	P17174	413 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	PSMC3	P17980	439 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	KDELR1	P24390	212 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	CASQ1	P31415	396 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	CHKA	P35790	457 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	ARL4A	P40617	200 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	ZNF211	Q13398	564 aa	Predicted RBP	18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	FBXL22	Q6P050	247 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	OSCP1	Q8WVF1	389 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	ZNF592	Q92610	1267 aa		18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	NAPG	Q99747	312 aa	Predicted RBP	18.24	■□□□□ 0.51
CTSB-222	ENST00000531551	CTAGE9	A4FU28	777 aa		18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	LRIG2	O94898	1065 aa		18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	CXCR5	P32302	372 aa		18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	TPI1	P60174	286 aa		18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	MMRN1	Q13201	1228 aa		18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	HTR4	Q13639	388 aa		18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	PDK2	Q15119	407 aa		18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	CFAP52	Q8N1V2	620 aa		18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	MYEOV	Q96EZ4	313 aa		18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	PRMT1	Q99873	361 aa	Known RBP	18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	STOML2	Q9UJZ1	356 aa		18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	DENND4A	Q7Z401	1863 aa		18.23	■□□□□ 0.51
CTSB-222	ENST00000531551	PYGM	P11217	842 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	EPHB2	P29323	1055 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	GDI1	P31150	447 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	DPYSL3	Q14195	570 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	AADACL2	Q6P093	401 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	RCOR2	Q8IZ40	523 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	EXD1	Q8NHP7	514 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	DDI1	Q8WTU0	396 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	DEPDC1B	Q8WUY9	529 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	IGSF8	Q969P0	613 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	ASIC4	Q96FT7	647 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	RBM41	Q96IZ5	413 aa	Known RBP	18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	TRMT61B	Q9BVS5	477 aa	Known RBP	18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	EBF3	Q9H4W6	596 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	CWC15	Q9P013	229 aa	Known RBP	18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	STIM2	Q9P246	746 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	ANHX	E9PGG2	379 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551		H3BRJ5	948 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	ASGR2	P07307	311 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	SGSH	P51688	502 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	ANO4	Q32M45	955 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	RABGAP1L	Q5R372	815 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	ACBD5	Q5T8D3	534 aa	Predicted RBP	18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	KAZN	Q674X7	775 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	MFSD7	Q6UXD7	560 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	CIR1	Q86X95	450 aa	Predicted RBP	18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	ZDHHC14	Q8IZN3	488 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	UBE2Q2	Q8WVN8	375 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	TBC1D31	Q96DN5	1066 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	TMA16	Q96EY4	203 aa	Known RBP	18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	MAK16	Q9BXY0	300 aa	Known RBP	18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	KCNK12	Q9HB15	430 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	PLK2	Q9NYY3	685 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	MPP6	Q9NZW5	540 aa		18.22	■□□□□ 0.51
CTSB-222	ENST00000531551	TYW5	A2RUC4	315 aa	Known RBP	18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	CYBB	P04839	570 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	ARSA	P15289	507 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	ARSE	P51690	589 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	RPS24	P62847	133 aa	Known RBP	18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	FCHO2	Q0JRZ9	810 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	EML3	Q32P44	896 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	DCAF12L1	Q5VU92	463 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	RFX8	Q6ZV50	586 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	TMEM25	Q86YD3	366 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	ADGRG2	Q8IZP9	1017 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	CPXM2	Q8N436	756 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	TTC8	Q8TAM2	541 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	OTUB2	Q96DC9	234 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	PRICKLE1	Q96MT3	831 aa	Predicted RBP	18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	CSPG4P5	Q96PW8	444 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	SPHK2	Q9NRA0	654 aa		18.21	■□□□□ 0.51
CTSB-222	ENST00000531551	FANCG	O15287	622 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	TBL1X	O60907	577 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	KRT10	P13645	584 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	CETN2	P41208	172 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	IRAK1	P51617	712 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	TNK2	Q07912	1038 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	SEMA3B	Q13214	749 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	MPPE1	Q53F39	396 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	LY6G5C	Q5SRR4	150 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	SEL1L2	Q5TEA6	688 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	SPOCD1	Q6ZMY3	1216 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	ANKS1B	Q7Z6G8	1248 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	FAM217A	Q8IXS0	508 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	IRF7	Q92985	503 aa		18.2	■□□□□ 0.5
CTSB-222	ENST00000531551	HEMGN	Q9BXL5	484 aa		18.2	■□□□□ 0.5

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