RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 FAM90A20PA6NIJ5 464 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 TARM1B6A8C7 271 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 TRIAP1O43715 76 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 TMCC2O75069 709 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 TMEM63AO94886 807 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 LARGE1O95461 756 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 CER1O95813 267 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 ITGALP20701 1170 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 PCSK6P29122 969 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 PPIFP30405 207 aaKnown RBP4.9□□□□□ -1.63
USP47-211ENST00000531513 NTSR1P30989 418 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 UQCRC1P31930 480 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 RAD52P43351 418 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 GATMP50440 423 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 PGDP52209 483 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 POU5F1Q01860 360 aaKnown RBP4.9□□□□□ -1.63
USP47-211ENST00000531513 CSHL1Q14406 222 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 BAK1Q16611 211 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 GALNTL6Q49A17 601 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 WDR45BQ5MNZ6 344 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 CERCAMQ5T4B2 595 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 MORN5Q5VZ52 161 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 RASGRP2Q7LDG7 609 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 TRABD2AQ86V40 505 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 SLC15A3Q8IY34 581 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.9□□□□□ -1.63
USP47-211ENST00000531513 ZMIZ2Q8NF64 920 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 SUN3Q8TAQ9 357 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 HMGB4Q8WW32 186 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 ZBTB45Q96K62 511 aaPredicted RBP4.9□□□□□ -1.63
USP47-211ENST00000531513 WDR24Q96S15 920 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 AMBRA1Q9C0C7 1298 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 NRIP3Q9NQ35 241 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 ZNF521Q96K83 1311 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 COL15A1P39059 1388 aa4.9□□□□□ -1.63
USP47-211ENST00000531513 VWA3AA6NCI4 1184 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 SAC3D1A6NKF1 404 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 KIF28PB7ZC32 967 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 F5H697 171 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 STX16-NPEPL1H3BU86 382 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 AGPSO00116 658 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 STX16O14662 325 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 CSF1RP07333 972 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 RRM1P23921 792 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 MPGP29372 298 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 KRTAP10-6P60371 365 aaPredicted RBP4.89□□□□□ -1.63
USP47-211ENST00000531513 TIAL1Q01085 375 aaKnown RBP eCLIP4.89□□□□□ -1.63
USP47-211ENST00000531513 TSTQ16762 297 aaKnown RBP4.89□□□□□ -1.63
USP47-211ENST00000531513 ARHGAP40Q5TG30 622 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 FAM205BPQ63HN1 556 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 SFRP4Q6FHJ7 346 aaPredicted RBP4.89□□□□□ -1.63
USP47-211ENST00000531513 DGAT2L7PQ6IED9 249 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 ANO7Q6IWH7 933 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 YTHDF3Q7Z739 585 aaKnown RBP4.89□□□□□ -1.63
USP47-211ENST00000531513 TMEM171Q8WVE6 324 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 FKBP10Q96AY3 582 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 RNF125Q96EQ8 232 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 NUDT16L1Q9BRJ7 211 aaKnown RBP4.89□□□□□ -1.63
USP47-211ENST00000531513 SDF4Q9BRK5 362 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 ALG8Q9BVK2 526 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 TPSD1Q9BZJ3 242 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 ACAD9Q9H845 621 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 SMYD2Q9NRG4 433 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 GPR34Q9UPC5 381 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 CNPY2Q9Y2B0 182 aa4.89□□□□□ -1.63
USP47-211ENST00000531513 TDRD9Q8NDG6 1382 aaKnown RBP4.89□□□□□ -1.63
USP47-211ENST00000531513 PI4KAP2A4QPH2 592 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 CCER2I3L3R5 266 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 SPTLC2O15270 562 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 KLK10O43240 276 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 CBFA2T3O75081 653 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 MOSPD3O75425 235 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 ZFXP17010 805 aaPredicted RBP4.88□□□□□ -1.63
USP47-211ENST00000531513 CHMP24386 653 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 RBL1P28749 1068 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 EPHA3P29320 983 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 PSMC2P35998 433 aaKnown RBP4.88□□□□□ -1.63
USP47-211ENST00000531513 POLD2P49005 469 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 DRG2P55039 364 aaKnown RBP4.88□□□□□ -1.63
USP47-211ENST00000531513 SETQ01105 290 aaPredicted RBP4.88□□□□□ -1.63
USP47-211ENST00000531513 SF3A3Q12874 501 aaKnown RBP eCLIP4.88□□□□□ -1.63
USP47-211ENST00000531513 CCNG2Q16589 344 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 MEA1Q16626 185 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 CCDC96Q2M329 555 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 PROSER3Q2NL68 480 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 TBRG1Q3YBR2 411 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 ZNF569Q5MCW4 686 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 RBM20Q5T481 1227 aaKnown RBP4.88□□□□□ -1.63
USP47-211ENST00000531513 NAA35Q5VZE5 725 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 RGS7BPQ6MZT1 257 aaPredicted RBP4.88□□□□□ -1.63
USP47-211ENST00000531513 MSANTD2Q6P1R3 559 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 PDXDC1Q6P996 788 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 CLEC9AQ6UXN8 241 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.88□□□□□ -1.63
USP47-211ENST00000531513 GALNT5Q7Z7M9 940 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 ARMC8Q8IUR7 673 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 LRRC71Q8N4P6 559 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 KTI12Q96EK9 354 aaPredicted RBP4.88□□□□□ -1.63
USP47-211ENST00000531513 MECRQ9BV79 373 aa4.88□□□□□ -1.63
USP47-211ENST00000531513 LMAN2LQ9H0V9 348 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms