RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 BEND5Q7L4P6 421 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 FAM124AQ86V42 546 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 ZCCHC9Q8N567 271 aaKnown RBP16.39■□□□□ 0.21
CPSF1-205ENST00000531042 ZNF557Q8N988 423 aaPredicted RBP16.39■□□□□ 0.21
CPSF1-205ENST00000531042 FIBINQ8TAL6 211 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 STK32AQ8WU08 396 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 ZNF606Q8WXB4 792 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 FAM149B1Q96BN6 582 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 SLC39A13Q96H72 371 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 LMLNQ96KR4 655 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 PRICKLE1Q96MT3 831 aaPredicted RBP16.39■□□□□ 0.21
CPSF1-205ENST00000531042 SERPINB11Q96P15 392 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 DDX50Q9BQ39 737 aaKnown RBP16.39■□□□□ 0.21
CPSF1-205ENST00000531042 SCNM1Q9BWG6 230 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 SLC4A5Q9BY07 1137 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 ADAM33Q9BZ11 813 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 ZDHHC5Q9C0B5 715 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 MIR1-1HGQ9H1L0 117 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 LHX5Q9H2C1 402 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 PRSS16Q9NQE7 514 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 STIM2Q9P246 746 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 TLR6Q9Y2C9 796 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 ASPMQ8IZT6 3477 aa16.39■□□□□ 0.21
CPSF1-205ENST00000531042 ZFHX4Q86UP3 3567 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 C1QTNF9BB2RNN3 333 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 MED7O43513 233 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 LETM1O95202 739 aaPredicted RBP16.38■□□□□ 0.21
CPSF1-205ENST00000531042 C1QTNF9P0C862 333 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 FAM193AP78312 1265 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 SYPL2Q5VXT5 272 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 MFN1Q8IWA4 741 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 HJURPQ8NCD3 748 aaPredicted RBP16.38■□□□□ 0.21
CPSF1-205ENST00000531042 ADAM32Q8TC27 787 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 TTC17Q96AE7 1141 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 MYEOVQ96EZ4 313 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 TMEM121BQ9BXQ6 578 aaPredicted RBP16.38■□□□□ 0.21
CPSF1-205ENST00000531042 PCED1AQ9H1Q7 454 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 FBRSQ9HAH7 460 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 KIAA1468Q9P260 1216 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 SUN2Q9UH99 717 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 CYTH4Q9UIA0 394 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 RWDD2AQ9UIY3 292 aa16.38■□□□□ 0.21
CPSF1-205ENST00000531042 TYW5A2RUC4 315 aaKnown RBP16.37■□□□□ 0.21
CPSF1-205ENST00000531042 BCAT2O15382 392 aaPredicted RBP16.37■□□□□ 0.21
CPSF1-205ENST00000531042 PAPSS1O43252 624 aaPredicted RBP16.37■□□□□ 0.21
CPSF1-205ENST00000531042 SH3BP5O60239 455 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 ACSL1P33121 698 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 RPS14P62263 151 aaKnown RBP16.37■□□□□ 0.21
CPSF1-205ENST00000531042 RPS24P62847 133 aaKnown RBP16.37■□□□□ 0.21
CPSF1-205ENST00000531042 ZBTB16Q05516 673 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 HNRNPDQ14103 355 aaKnown RBP16.37■□□□□ 0.21
CPSF1-205ENST00000531042 MS4A13Q5J8X5 152 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 TRIM65Q6PJ69 517 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 ENOSF1Q7L5Y1 443 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 TMEM110Q86TL2 294 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 TAC4Q86UU9 113 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 C1orf216Q8TAB5 229 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 MYO19Q96H55 970 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 CRACR2AQ9BSW2 395 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 TRIM62Q9BVG3 475 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 NUCKS1Q9H1E3 243 aaKnown RBP16.37■□□□□ 0.21
CPSF1-205ENST00000531042 ACP6Q9NPH0 428 aa16.37■□□□□ 0.21
CPSF1-205ENST00000531042 EIF2B4Q9UI10 523 aaKnown RBP16.37■□□□□ 0.21
CPSF1-205ENST00000531042 INTS6Q9UL03 887 aaKnown RBP16.37■□□□□ 0.21
CPSF1-205ENST00000531042 CFAP47Q6ZTR5 3102 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 E5RJQ4 531 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 CAPN9O14815 690 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 THAP12O43422 761 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 HYAL3O43820 417 aaPredicted RBP16.36■□□□□ 0.21
CPSF1-205ENST00000531042 MOCS2O96007 188 aaPredicted RBP16.36■□□□□ 0.21
CPSF1-205ENST00000531042 DNTTP04053 509 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 GNA15P30679 374 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 BNC1Q01954 994 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 GJB7Q6PEY0 223 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 CARNMT1Q8N4J0 409 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 FAM81BQ96LP2 452 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 CAMK1GQ96NX5 476 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 MED15Q96RN5 788 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 C6orf106Q9H6K1 298 aaPredicted RBP16.36■□□□□ 0.21
CPSF1-205ENST00000531042 POPDC2Q9HBU9 364 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 NUMA1Q14980 2115 aa16.36■□□□□ 0.21
CPSF1-205ENST00000531042 ZZEF1O43149 2961 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 BECN2A8MW95 431 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 LUC7L3O95232 432 aaKnown RBP16.35■□□□□ 0.21
CPSF1-205ENST00000531042 IGLV3-25P01717 112 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 ASLP04424 464 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 SLC9A1P19634 815 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 CSKP41240 450 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 ST8SIA6P61647 398 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 YWHAZP63104 245 aaKnown RBP16.35■□□□□ 0.21
CPSF1-205ENST00000531042 TRIP6Q15654 476 aaKnown RBP16.35■□□□□ 0.21
CPSF1-205ENST00000531042 CAMK4Q16566 473 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 DCAF6Q58WW2 860 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 ZC3H12AQ5D1E8 599 aaKnown RBP16.35■□□□□ 0.21
CPSF1-205ENST00000531042 FSCBQ5H9T9 825 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 CREBRFQ8IUR6 639 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 NAXDQ8IW45 347 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 CFAP52Q8N1V2 620 aa16.35■□□□□ 0.21
CPSF1-205ENST00000531042 KDF1Q8NAX2 398 aaPredicted RBP16.35■□□□□ 0.21
CPSF1-205ENST00000531042 GATA6Q92908 595 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms