RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 FOXL1Q12952 345 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 PTP4A2Q12974 167 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 BECN1Q14457 450 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 KCNJ12Q14500 433 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 MED22Q15528 200 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 TAF11Q15544 211 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 PKN1Q16512 942 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 GEN1Q17RS7 908 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 LY6KQ17RY6 165 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 ERCC6LQ2NKX8 1250 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 VMACQ2NL98 169 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 AASDHQ4L235 1098 aaPredicted RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 PDCD4Q53EL6 469 aaKnown RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 PLAC9Q5JTB6 97 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 ZNF618Q5T7W0 954 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 NT5DC1Q5TFE4 455 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 FAM90A2PQ658T7 463 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 SP5Q6BEB4 398 aaPredicted RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 MTHFD1LQ6UB35 978 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 FAM83HQ6ZRV2 1179 aaPredicted RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 TMPRSS9Q7Z410 1059 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 KDELC2Q7Z4H8 507 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 POLNQ7Z5Q5 900 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 PRPF39Q86UA1 669 aaKnown RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 DTX2Q86UW9 622 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 VSIG1Q86XK7 387 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 ULK2Q8IYT8 1036 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 GHDCQ8N2G8 530 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 TMEM132CQ8N3T6 1108 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 METTL25Q8N6Q8 603 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 ENDOVQ8N8Q3 282 aaKnown RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 POMGNT2Q8NAT1 580 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 LSM14AQ8ND56 463 aaKnown RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 TOR1AIP2Q8NFQ8 470 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 OR52L2PQ8NGH6 319 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 CREB3L4Q8TEY5 395 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 SOCS4Q8WXH5 440 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 CNOT9Q92600 299 aaKnown RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 FKBP10Q96AY3 582 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 DACT3Q96B18 629 aaPredicted RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 FAM149B1Q96BN6 582 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 RNFT2Q96EX2 444 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 FAM89AQ96GI7 184 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 CMTM3Q96MX0 182 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 GNRHR2Q96P88 292 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 LENG8Q96PV6 779 aaPredicted RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 ASB2Q96Q27 587 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 MNTQ99583 582 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 MXD3Q9BW11 206 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 NPLQ9BXD5 320 aaPredicted RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 ALOXE3Q9BYJ1 711 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 AMBRA1Q9C0C7 1298 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 CTDSP1Q9GZU7 261 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 ALDH8A1Q9H2A2 487 aaPredicted RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 RABEP2Q9H5N1 569 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 EPHX3Q9H6B9 360 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 TTC12Q9H892 705 aaPredicted RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 IL21RQ9HBE5 538 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 USP29Q9HBJ7 922 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 GALNT9Q9HCQ5 603 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 ZFP64Q9NPA5 681 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 KCNK9Q9NPC2 374 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 SLC35C2Q9NQQ7 365 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 PLSCR4Q9NRQ2 329 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 RXFP3Q9NSD7 469 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 TAB2Q9NYJ8 693 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 MRPL15Q9P015 296 aaKnown RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 CPSF2Q9P2I0 782 aaKnown RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 MGAT4CQ9UBM8 478 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 SLC25A10Q9UBX3 287 aaPredicted RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 ZFR2Q9UPR6 939 aaKnown RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 COPG1Q9Y678 874 aaKnown RBP2.26□□□□□ -2.05
FGFR1-235ENST00000530701 KCNE2Q9Y6J6 123 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 ADAMTS20P59510 1910 aa2.26□□□□□ -2.05
FGFR1-235ENST00000530701 CCDC187A0A096LP49 1063 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 GAGE12BA1L429 117 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 GAGE12HA6NDE8 117 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 NPIPB15A6NHN6 443 aaPredicted RBP2.25□□□□□ -2.05
FGFR1-235ENST00000530701 LRRC53A6NM62 1247 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 A8MV72 311 aaPredicted RBP2.25□□□□□ -2.05
FGFR1-235ENST00000530701 TEX22C9J3V5 150 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 H7C0S8 307 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 AP4M1O00189 453 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 ZNF185O15231 689 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 CA12O43570 354 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 NUAK1O60285 661 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 PMPCBO75439 489 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 RAD17O75943 681 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 PDHA1P08559 390 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 CLTBP09497 229 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 TMIGD3P0DMS9 266 aaPredicted RBP2.25□□□□□ -2.05
FGFR1-235ENST00000530701 MED14OSP0DP75 135 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 IRF1P10914 325 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 PPP3CBP16298 524 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 COMTP21964 271 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 SP100P23497 879 aaPredicted RBP2.25□□□□□ -2.05
FGFR1-235ENST00000530701 GATA3P23771 443 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 DUSP1P28562 367 aa2.25□□□□□ -2.05
FGFR1-235ENST00000530701 EEF1DP29692 281 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms