RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 RNF139Q8WU17 664 aa14.9□□□□□ -0.02
TTC39A-216ENST00000530004 GCNAQ96QF7 691 aa14.9□□□□□ -0.02
TTC39A-216ENST00000530004 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.9□□□□□ -0.02
TTC39A-216ENST00000530004 CD207Q9UJ71 328 aa14.9□□□□□ -0.02
TTC39A-216ENST00000530004 GREB1Q4ZG55 1949 aa14.9□□□□□ -0.02
TTC39A-216ENST00000530004 ZNF197O14709 1029 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 IGLV3-25P01717 112 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 ITGAVP06756 1048 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 GOT1P17174 413 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 GBP1P32455 592 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 ARL4AP40617 200 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 RPL21P46778 160 aaKnown RBP14.89□□□□□ -0.03
TTC39A-216ENST00000530004 CXCR3P49682 368 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 CYP4F8P98187 520 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 TRIP13Q15645 432 aaPredicted RBP14.89□□□□□ -0.03
TTC39A-216ENST00000530004 ARL13BQ3SXY8 428 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 C1orf228Q6PIY5 440 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 MTERF4Q7Z6M4 381 aaKnown RBP14.89□□□□□ -0.03
TTC39A-216ENST00000530004 PLD5Q8N7P1 536 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.89□□□□□ -0.03
TTC39A-216ENST00000530004 MRPS31Q92665 395 aaKnown RBP14.89□□□□□ -0.03
TTC39A-216ENST00000530004 P3H4Q92791 437 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 HLA-CQ95604 372 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 RIPOR3Q96MK2 946 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 CSPG4P5Q96PW8 444 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 FUT8Q9BYC5 575 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 NEUROG2Q9H2A3 272 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 SMOC2Q9H3U7 446 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 WDCPQ9H6R7 721 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 ANLNQ9NQW6 1124 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 CWC15Q9P013 229 aaKnown RBP14.89□□□□□ -0.03
TTC39A-216ENST00000530004 RCOR3Q9P2K3 495 aaPredicted RBP14.89□□□□□ -0.03
TTC39A-216ENST00000530004 ASIC3Q9UHC3 531 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 DRG1Q9Y295 367 aaKnown RBP14.89□□□□□ -0.03
TTC39A-216ENST00000530004 MRPS23Q9Y3D9 190 aaKnown RBP14.89□□□□□ -0.03
TTC39A-216ENST00000530004 MYO16Q9Y6X6 1858 aa14.89□□□□□ -0.03
TTC39A-216ENST00000530004 MCF2LO15068 1137 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 IRAK2O43187 625 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 SASH3O75995 380 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 FAM153BP0C7A2 387 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 RARGP13631 454 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 TGM2P21980 687 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 TUBP50607 506 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 EIF3EP60228 445 aaKnown RBP14.88□□□□□ -0.03
TTC39A-216ENST00000530004 SCAPQ12770 1279 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 NOMO1Q15155 1222 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 TEAD2Q15562 447 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 FAM153CQ494X1 144 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 HDXQ7Z353 690 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 ZNF276Q8N554 614 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 ALLCQ8N6M5 410 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 MAFAQ8NHW3 353 aaPredicted RBP14.88□□□□□ -0.03
TTC39A-216ENST00000530004 CAVIN3Q969G5 261 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 RNF34Q969K3 372 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 TKTL2Q9H0I9 626 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 SFMBT1Q9UHJ3 866 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 FAM153AQ9UHL3 310 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 NUDT5Q9UKK9 219 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 NEU2Q9Y3R4 380 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 CLUHO75153 1309 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 C2orf78A6NCI8 922 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 H3BRJ5 948 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 I6L893 689 aaPredicted RBP14.88□□□□□ -0.03
TTC39A-216ENST00000530004 ATP8B1O43520 1251 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 CREB3O43889 395 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 TLR5O60602 858 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 OAS1P00973 400 aaKnown RBP14.88□□□□□ -0.03
TTC39A-216ENST00000530004 KRT14P02533 472 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 FSHRP23945 695 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 MTHFRP42898 656 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 EIF4EBP2Q13542 120 aaPredicted RBP14.88□□□□□ -0.03
TTC39A-216ENST00000530004 CASP8Q14790 479 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 HECTD3Q5T447 861 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 STXBP5Q5T5C0 1151 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 TXNDC8Q6A555 127 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 ITFG1Q8TB96 612 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 SUSD6Q92537 303 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 TMEM121Q9BTD3 319 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 CCSER2Q9H7U1 834 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 GRHL1Q9NZI5 618 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 USP15Q9Y4E8 981 aaPredicted RBP14.88□□□□□ -0.03
TTC39A-216ENST00000530004 HEY1Q9Y5J3 304 aa14.88□□□□□ -0.03
TTC39A-216ENST00000530004 SGK1O00141 431 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 MSI1O43347 362 aaKnown RBP14.87□□□□□ -0.03
TTC39A-216ENST00000530004 ZFXP17010 805 aaPredicted RBP14.87□□□□□ -0.03
TTC39A-216ENST00000530004 CEBPBP17676 345 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 AMPD1P23109 780 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 DDX6P26196 483 aaKnown RBP eCLIP14.87□□□□□ -0.03
TTC39A-216ENST00000530004 VPS41P49754 854 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 PLTPP55058 493 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 NNTQ13423 1086 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 ARHGAP15Q53QZ3 475 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 GPR158Q5T848 1215 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 PRUNE1Q86TP1 453 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 MAB21L3Q8N8X9 362 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 CCDC89Q8N998 374 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 CDK5RAP1Q96SZ6 601 aaKnown RBP14.87□□□□□ -0.03
TTC39A-216ENST00000530004 C10orf88Q9H8K7 445 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 TRPC7Q9HCX4 862 aa14.87□□□□□ -0.03
TTC39A-216ENST00000530004 ZDHHC18Q9NUE0 388 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms