RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ZC3H14Q6PJT7 736 aaKnown RBP13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 TRMT11Q7Z4G4 463 aaKnown RBP13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 KIAA0907Q7Z7F0 614 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 CHSY1Q86X52 802 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 VSTM4Q8IW00 320 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 LGI2Q8N0V4 545 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 CAMKK1Q8N5S9 505 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 ZNF513Q8N8E2 541 aaPredicted RBP13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 TXNDC5Q8NBS9 432 aaKnown RBP13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 FIBINQ8TAL6 211 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 ATRIPQ8WXE1 791 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 SELENOOQ9BVL4 669 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 TKTL2Q9H0I9 626 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 ZDHHC4Q9NPG8 344 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 STIM2Q9P246 746 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 PAXBP1Q9Y5B6 917 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 HS3ST4Q9Y661 456 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 R4GN57 208 aa13.12□□□□□ -0.31
CCDC90B-216ENST00000529856 CCDC163A0A0D9SF12 145 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 TYW5A2RUC4 315 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 F5H5T6 163 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 I6L893 689 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 TIMM44O43615 452 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 RTN2O75298 545 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 PAGE1O75459 146 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 FTLP02792 175 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 HNRNPLP14866 589 aaKnown RBP eCLIP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 RRM1P23921 792 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 HLA-FP30511 346 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 NTSR1P30989 418 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 SDC4P31431 198 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 HNRNPH3P31942 346 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 RDXP35241 583 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 PTPN9P43378 593 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 FNTBP49356 437 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 DGKEP52429 567 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 ATXN1P54253 815 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 ATP11AP98196 1134 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 AUHQ13825 339 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 TRIM14Q14142 442 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 EIF4HQ15056 248 aaKnown RBP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 C15orf59Q2T9L4 293 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 EOGTQ5NDL2 527 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 PPP1R15BQ5SWA1 713 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 EGFLAMQ63HQ2 1017 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 TMEM215Q68D42 235 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 DNAJC24Q6P3W2 148 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 WDR59Q6PJI9 974 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 SARM1Q6SZW1 724 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 ANKS1BQ7Z6G8 1248 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 LONP2Q86WA8 852 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 DRC7Q8IY82 874 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 CFAP52Q8N1V2 620 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 ZNF557Q8N988 423 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 WFDC5Q8TCV5 224 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 CENPIQ92674 756 aaPredicted RBP13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 LMLNQ96KR4 655 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 SEMA4AQ9H3S1 761 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 ANLNQ9NQW6 1124 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 ELOVL2Q9NXB9 296 aa13.11□□□□□ -0.31
CCDC90B-216ENST00000529856 AP5Z1O43299 807 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 APBB3O95704 486 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 PABPC1P11940 636 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 GPD1P21695 349 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 RPL7AP62424 266 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 C5orf22Q49AR2 442 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 RAB6CQ53S08 254 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 TDRD12Q587J7 1177 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 ACBD5Q5T8D3 534 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 SH3PXD2AQ5TCZ1 1133 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 HEATR6Q6AI08 1181 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 PLEKHA7Q6IQ23 1121 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 FBXL22Q6P050 247 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 STRADAQ7RTN6 431 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 C14orf80Q86SX3 495 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 ADIPOR2Q86V24 386 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 WDR5BQ86VZ2 330 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 GAS2L3Q86XJ1 694 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 DNAAF5Q86Y56 855 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 MFN1Q8IWA4 741 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 CARNMT1Q8N4J0 409 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 OR8K1Q8NGG5 319 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 WFIKKN2Q8TEU8 576 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 UCMAQ8WVF2 138 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 IGSF8Q969P0 613 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 C1orf74Q96LT6 269 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 HHIPQ96QV1 700 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 HAPLN3Q96S86 360 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 ACOX2Q99424 681 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 RAB6CQ9H0N0 254 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 ISCUQ9H1K1 167 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 ABCB8Q9NUT2 735 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 PARVAQ9NVD7 372 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 THAP10Q9P2Z0 257 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 EBF1Q9UH73 591 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 ADAMTS1Q9UHI8 967 aa13.1□□□□□ -0.31
CCDC90B-216ENST00000529856 GGA2Q9UJY4 613 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms