RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 CNDP2Q96KP4 475 aaKnown RBP12.04□□□□□ -0.48
CMTM1-211ENST00000528484 ELF4Q99607 663 aaPredicted RBP12.04□□□□□ -0.48
CMTM1-211ENST00000528484 OMDQ99983 421 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 DDX50Q9BQ39 737 aaKnown RBP12.04□□□□□ -0.48
CMTM1-211ENST00000528484 IRX2Q9BZI1 471 aaPredicted RBP12.04□□□□□ -0.48
CMTM1-211ENST00000528484 APOBEC3GQ9HC16 384 aaKnown RBP12.04□□□□□ -0.48
CMTM1-211ENST00000528484 TMEM8AQ9HCN3 771 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 PRSS16Q9NQE7 514 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 CISHQ9NSE2 258 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 FBXL12Q9NXK8 326 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 USP25Q9UHP3 1055 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 CFAP45Q9UL16 551 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 TPX2Q9ULW0 747 aaKnown RBP12.04□□□□□ -0.48
CMTM1-211ENST00000528484 SHROOM3Q8TF72 1996 aa12.04□□□□□ -0.48
CMTM1-211ENST00000528484 A0A1W2PPC4 97 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 CAPN8A6NHC0 703 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 K7ELQ4 463 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-211ENST00000528484 IRAK2O43187 625 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 MOCS3O95396 460 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 ASLP04424 464 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 MXI1P50539 228 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 YWHAEP62258 255 aaKnown RBP12.03□□□□□ -0.48
CMTM1-211ENST00000528484 FOXD4L6Q3SYB3 417 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-211ENST00000528484 MPP7Q5T2T1 576 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 FOXD4L5Q5VV16 416 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-211ENST00000528484 NUGGCQ68CJ6 796 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 ARHGAP17Q68EM7 881 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 ATL3Q6DD88 541 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 FOXD4L3Q6VB84 417 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-211ENST00000528484 MFN1Q8IWA4 741 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 UNC45BQ8IWX7 931 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.03□□□□□ -0.48
CMTM1-211ENST00000528484 RBBP8NLQ8NC74 664 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-211ENST00000528484 FOXD4L4Q8WXT5 416 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-211ENST00000528484 ULBP1Q9BZM6 244 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 PABPC3Q9H361 631 aaKnown RBP12.03□□□□□ -0.48
CMTM1-211ENST00000528484 ABCC13Q9NSE7 274 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 SERTAD1Q9UHV2 236 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 PCDHA7Q9UN72 937 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 TRAF3IP3Q9Y228 551 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
CMTM1-211ENST00000528484 XPO1O14980 1071 aaKnown RBP12.02□□□□□ -0.49
CMTM1-211ENST00000528484 KLRC4O43908 158 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 RNASEH2AO75792 299 aaKnown RBP12.02□□□□□ -0.49
CMTM1-211ENST00000528484 HSP90AA1P07900 732 aaKnown RBP12.02□□□□□ -0.49
CMTM1-211ENST00000528484 CD38P28907 300 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 ADIGQ0VDE8 80 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 BST2Q10589 180 aaKnown RBP12.02□□□□□ -0.49
CMTM1-211ENST00000528484 NFIL3Q16649 462 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 GOLGA7BQ2TAP0 167 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 HS1BP3Q53T59 392 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 SGO2Q562F6 1265 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 RNF219Q5W0B1 726 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-211ENST00000528484 BSPRYQ5W0U4 402 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 PM20D1Q6GTS8 502 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 ADIPOR2Q86V24 386 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 GATAD2AQ86YP4 633 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 SLC4A11Q8NBS3 891 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 LSM14AQ8ND56 463 aaKnown RBP12.02□□□□□ -0.49
CMTM1-211ENST00000528484 FBXL13Q8NEE6 735 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 OR2T34Q8NGX1 318 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 ADAM32Q8TC27 787 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 PAGE5Q96GU1 130 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 SLC6A18Q96N87 628 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 FCRL3Q96P31 734 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-211ENST00000528484 RSPH9Q9H1X1 276 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-211ENST00000528484 SFMBT1Q9UHJ3 866 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 STOML2Q9UJZ1 356 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 SLCO1B1Q9Y6L6 691 aa12.02□□□□□ -0.49
CMTM1-211ENST00000528484 ASH1LQ9NR48 2969 aaKnown RBP12.02□□□□□ -0.49
CMTM1-211ENST00000528484 COL5A1P20908 1838 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-211ENST00000528484 ATXN7O15265 892 aaPredicted RBP12.01□□□□□ -0.49
CMTM1-211ENST00000528484 MAGEC1O60732 1142 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 TBL1XO60907 577 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 IGHV4-34P06331 123 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 SETSIPP0DME0 302 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 C7P10643 843 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 EPB41P11171 864 aaKnown RBP12.01□□□□□ -0.49
CMTM1-211ENST00000528484 CD19P15391 556 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 EIF2S3P41091 472 aaKnown RBP12.01□□□□□ -0.49
CMTM1-211ENST00000528484 RAD23BP54727 409 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 PPP3CAQ08209 521 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 ILKQ13418 452 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 ADAM9Q13443 819 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 CDH18Q13634 790 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 CST6Q15828 149 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 C1orf220Q5T0J3 134 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 HES3Q5TGS1 186 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 NCEH1Q6PIU2 408 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 SND1Q7KZF4 910 aaKnown RBP eCLIP12.01□□□□□ -0.49
CMTM1-211ENST00000528484 ZNF605Q86T29 641 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 EID2Q8N6I1 236 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 HJURPQ8NCD3 748 aaPredicted RBP12.01□□□□□ -0.49
CMTM1-211ENST00000528484 EDEM1Q92611 657 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 COL26A1Q96A83 441 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 CRELD1Q96HD1 420 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 CCDC34Q96HJ3 373 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 NRSN2Q9GZP1 204 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 CNGB3Q9NQW8 809 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 RAB20Q9NX57 234 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms