RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SCML2Q9UQR0 700 aa15.21■□□□□ 0.03
ECHDC1-220ENST00000528402 SDR42E2A6NKP2 422 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 RNF103O00237 685 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 TM9SF1O15321 606 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 IRAK2O43187 625 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 APOEP02649 317 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 VAV1P15498 845 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 DNAJB2P25686 324 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 NRLP54845 237 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 CORO7P57737 925 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 GALNT2Q10471 571 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 NAB1Q13506 487 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 SLC39A12Q504Y0 691 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 NUGGCQ68CJ6 796 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 ZNF280DQ6N043 979 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 C6orf89Q6UWU4 347 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 RGS9BPQ6ZS82 235 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 CAPN12Q6ZSI9 719 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 TAC4Q86UU9 113 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 TAX1BP1Q86VP1 789 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 LRRC6Q86X45 466 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 ANKRD42Q8N9B4 389 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 CCDC197Q8NCU1 140 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 GSDMBQ8TAX9 411 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 DENND1AQ8TEH3 1009 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 C2orf15Q8WU43 125 aaKnown RBP15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 EDEM1Q92611 657 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 MTBPQ96DY7 904 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 SIGLEC10Q96LC7 697 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 CEP295NLQ96MC4 621 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 SERPINB11Q96P15 392 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 TMEM209Q96SK2 561 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 LGMNQ99538 433 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 RABEP2Q9H5N1 569 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 CATSPERBQ9H7T0 1116 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 ADAM28Q9UKQ2 775 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 PCDHA11Q9Y5I1 949 aa15.2■□□□□ 0.02
ECHDC1-220ENST00000528402 BANF1O75531 89 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 KRT37O76014 449 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 RTN3O95197 1032 aaPredicted RBP15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 MAP3K6O95382 1288 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 MT-ND3P03897 115 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 CREB1P16220 341 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 CNTFP26441 200 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 PSEN1P49768 467 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 SERPINB9P50453 376 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 VARS2Q5ST30 1063 aaKnown RBP15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 TTC39BQ5VTQ0 682 aaPredicted RBP15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 MSANTD2Q6P1R3 559 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 PID1Q7Z2X4 250 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 IGDCC3Q8IVU1 814 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 LRRC34Q8IZ02 419 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 OTUD6BQ8N6M0 293 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 ADAM32Q8TC27 787 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 ZNF296Q8WUU4 475 aaPredicted RBP15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 C1orf74Q96LT6 269 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 RHOBTB2Q9BYZ6 727 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 OLA1Q9NTK5 396 aaKnown RBP15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 IL37Q9NZH6 218 aa15.19■□□□□ 0.02
ECHDC1-220ENST00000528402 TYROBPO43914 113 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 NBNO60934 754 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 LRIG2O94898 1065 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 ASMTLO95671 621 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 FGFR3P22607 806 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 EPHB2P29323 1055 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 HOXC13P31276 330 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 VEGFBP49765 207 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 WASHC5Q12768 1159 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 SEPT7Q16181 437 aaKnown RBP15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 CTXN3Q4LDR2 81 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 STEAP4Q687X5 459 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 SCN4BQ8IWT1 228 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 DBF4BQ8NFT6 615 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 SPPL2BQ8TCT7 592 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 TTC17Q96AE7 1141 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 CASD1Q96PB1 797 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 TSGA13Q96PP4 275 aa15.18■□□□□ 0.02
ECHDC1-220ENST00000528402 MAGEB16A2A368 324 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 FAM72CH0Y354 149 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 KRT38O76015 456 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 SUN1O94901 812 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 SNRPAP09012 282 aaKnown RBP15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 KRT4P19013 534 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 CA4P22748 312 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 CCNCP24863 283 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 GARSP41250 739 aaKnown RBP15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 IFNAR2P48551 515 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 RABGGTBP53611 331 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 DNAJC3Q13217 504 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 MPP2Q14168 576 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 FRG1Q14331 258 aaKnown RBP15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 PRPSAP1Q14558 356 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 KBTBD12Q3ZCT8 623 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 TEX44Q53QW1 395 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 FAXCQ5TGI0 409 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 FAM72AQ5TYM5 149 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 FAM72DQ6L9T8 149 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 CCDC121Q6ZUS5 278 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 DENND5BQ6ZUT9 1274 aa15.17■□□□□ 0.02
ECHDC1-220ENST00000528402 ZNF534Q76KX8 674 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms