RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 C10orf88Q9H8K7 445 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 CCDC160A6NGH7 325 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 ERI2A8K979 691 aaKnown RBP15.46■□□□□ 0.07
USP47-207ENST00000527733 ZSCAN5DPP0CG00 497 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 CCL5P13501 91 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 CNTFP26441 200 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 MPP3Q13368 585 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 IRF5Q13568 498 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 TTLL9Q3SXZ7 439 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 PRKD2Q9BZL6 878 aa15.46■□□□□ 0.07
USP47-207ENST00000527733 MRPL42Q9Y6G3 142 aaKnown RBP15.46■□□□□ 0.07
USP47-207ENST00000527733 THSD7AQ9UPZ6 1657 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 SLC9A3R1O14745 358 aaPredicted RBP15.46■□□□□ 0.06
USP47-207ENST00000527733 RIPK2O43353 540 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 RNASEH1O60930 286 aaKnown RBP15.46■□□□□ 0.06
USP47-207ENST00000527733 CHRNB2P17787 502 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 MMP13P45452 471 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 TAF10Q12962 218 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 ACBD5Q5T8D3 534 aaPredicted RBP15.46■□□□□ 0.06
USP47-207ENST00000527733 ARHGAP17Q68EM7 881 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 DDIASQ8IXT1 998 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 GPR152Q8TDT2 470 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 TEKT4Q8WW24 435 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 PCED1BQ96HM7 432 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 MS4A4AQ96JQ5 239 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 CCT8L2Q96SF2 557 aa15.46■□□□□ 0.06
USP47-207ENST00000527733 GYG2O15488 501 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 GLUD1P00367 558 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 APOA4P06727 396 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 ITGALP20701 1170 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 LSP1P33241 339 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 ADRA1BP35368 520 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 PLA2G4AP47712 749 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 SMAD3P84022 425 aaKnown RBP15.45■□□□□ 0.06
USP47-207ENST00000527733 NLRP9Q7RTR0 991 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 RSPH1Q8WYR4 309 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 C2orf49Q9BVC5 232 aaPredicted RBP15.45■□□□□ 0.06
USP47-207ENST00000527733 DPEP3Q9H4B8 488 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 TMBIM4Q9HC24 238 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 MRPS23Q9Y3D9 190 aaKnown RBP15.45■□□□□ 0.06
USP47-207ENST00000527733 MYBPHLA2RUH7 354 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 FECHP22830 423 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 RBBP7Q16576 425 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 VARS2Q5ST30 1063 aaKnown RBP15.45■□□□□ 0.06
USP47-207ENST00000527733 UGT3A1Q6NUS8 523 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 STRA8Q7Z7C7 330 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 ARL8AQ96BM9 186 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 POLR1EQ9GZS1 481 aaKnown RBP15.45■□□□□ 0.06
USP47-207ENST00000527733 TRMT6Q9UJA5 497 aaKnown RBP15.45■□□□□ 0.06
USP47-207ENST00000527733 ARL2BPQ9Y2Y0 163 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 AKAP11Q9UKA4 1901 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 IGKV6D-21A0A0A0MT36 114 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 GLRA3O75311 464 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 ITGAVP06756 1048 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 TPH1P17752 444 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 ANKRD20A2Q5SQ80 823 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 TMTC4Q5T4D3 741 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 ANKRD20A1Q5TYW2 823 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 ZCCHC9Q8N567 271 aaKnown RBP15.45■□□□□ 0.06
USP47-207ENST00000527733 ARMC2Q8NEN0 867 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 ZNF296Q8WUU4 475 aaPredicted RBP15.45■□□□□ 0.06
USP47-207ENST00000527733 LRRC39Q96DD0 335 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 PCDH18Q9HCL0 1135 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 STK39Q9UEW8 545 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 EFR3BQ9Y2G0 817 aa15.45■□□□□ 0.06
USP47-207ENST00000527733 SRP72O76094 671 aaKnown RBP15.44■□□□□ 0.06
USP47-207ENST00000527733 SYF2O95926 243 aaKnown RBP15.44■□□□□ 0.06
USP47-207ENST00000527733 LMO2P25791 158 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 SESN3P58005 492 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 C16orf59Q7L2K0 433 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 LPCAT1Q8NF37 534 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 IRGQQ8WZA9 623 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 EFHD1Q9BUP0 239 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 DDX23Q9BUQ8 820 aaKnown RBP15.44■□□□□ 0.06
USP47-207ENST00000527733 MYH6P13533 1939 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 LZTS3O60299 673 aaPredicted RBP15.44■□□□□ 0.06
USP47-207ENST00000527733 LRCH4O75427 683 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 FAM153BP0C7A2 387 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 SERPINB8P50452 374 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 SFSWAPQ12872 951 aaKnown RBP15.44■□□□□ 0.06
USP47-207ENST00000527733 SOWAHAQ2M3V2 549 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 MUM1Q2TAK8 710 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 FAM153CQ494X1 144 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 AGAP9Q5VTM2 703 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 E2F7Q96AV8 911 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 FCRL2Q96LA5 508 aaPredicted RBP15.44■□□□□ 0.06
USP47-207ENST00000527733 ETNK2Q9NVF9 386 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 SFMBT1Q9UHJ3 866 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 COG5Q9UP83 839 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 GLP2RO95838 553 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 STMN1P16949 149 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 MGAT1P26572 445 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 SLC5A3P53794 718 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 DRG2P55039 364 aaKnown RBP15.44■□□□□ 0.06
USP47-207ENST00000527733 TIGD5Q53EQ6 642 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 DENND1CQ8IV53 801 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 HS6ST3Q8IZP7 471 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 ALLCQ8N6M5 410 aa15.44■□□□□ 0.06
USP47-207ENST00000527733 AENQ8WTP8 325 aaKnown RBP15.44■□□□□ 0.06
USP47-207ENST00000527733 ARHGAP39Q9C0H5 1083 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms