RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PCDH18Q9HCL0 1135 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 TXNDC16Q9P2K2 825 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 PCDHA11Q9Y5I1 949 aa12.86□□□□□ -0.35
CAPN1-208ENST00000527323 BCLAF3A2AJT9 711 aaKnown RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 TPP1O14773 563 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 MAFO75444 373 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 PGK1P00558 417 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 VTNP04004 478 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 NFICP08651 508 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 IL4RP24394 825 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 SESN2P58004 480 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 CCNIQ14094 377 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 IER5Q5VY09 327 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 MPZL3Q6UWV2 235 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 ANKRD23Q86SG2 305 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 C10orf107Q8IVU9 208 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 CDKL3Q8IVW4 592 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 ICA1LQ8NDH6 482 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 MCUQ8NE86 351 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 CDKL2Q92772 493 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 ZNF778Q96MU6 729 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 GPR20Q99678 358 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 CDH22Q9UJ99 828 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 PACSIN3Q9UKS6 424 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 NR2E3Q9Y5X4 410 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 ZSWIM8A7E2V4 1837 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 CCDC160A6NGH7 325 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 A6NJR5 290 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 DCXO43602 365 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 B4GALT4O60513 344 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 SERPINE1P05121 402 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 DESP17661 470 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 SDC4P31431 198 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 IDH3AP50213 366 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 TBL3Q12788 808 aaKnown RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 PDK3Q15120 406 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 MBLAC2Q68D91 279 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 TAPT1Q6NXT6 567 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 RNF111Q6ZNA4 994 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 CYP4V2Q6ZWL3 525 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 ADGRG6Q86SQ4 1221 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 EZH1Q92800 747 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 NMD3Q96D46 503 aaKnown RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 SIX4Q9UIU6 781 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 POMPQ9Y244 141 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 TMEM88BA6NKF7 163 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 CCNT2O60583 730 aaKnown RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 GLRA3O75311 464 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 VDRP11473 427 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 FGF3P11487 239 aaPredicted RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 HNRNPDQ14103 355 aaKnown RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 TARBP2Q15633 366 aaKnown RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 ZNF792Q3KQV3 632 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 CCDC14Q49A88 953 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 CELF3Q5SZQ8 465 aaKnown RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 C1orf127Q8N9H9 656 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 SEPT1Q8WYJ6 367 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 GCNAQ96QF7 691 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 SIKE1Q9BRV8 207 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 SNRNP25Q9BV90 132 aaKnown RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 DHX35Q9H5Z1 703 aaKnown RBP12.85□□□□□ -0.35
CAPN1-208ENST00000527323 XPNPEP3Q9NQH7 507 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 CLIC5Q9NZA1 410 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 ITGA11Q9UKX5 1188 aa12.85□□□□□ -0.35
CAPN1-208ENST00000527323 PLIN3O60664 434 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 CILPO75339 1184 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 PGM3O95394 542 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 EDNRBP24530 442 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 CYP2F1P24903 491 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 TYK2P29597 1187 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 GBE1Q04446 702 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 TUBB3Q13509 450 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 ITGA9Q13797 1035 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 PDE1CQ14123 709 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-208ENST00000527323 PPM1JQ5JR12 505 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 MAP3K21Q5TCX8 1036 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 OLFML2BQ68BL8 750 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 SATL1Q86VE3 508 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 AGR3Q8TD06 166 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 JADE3Q92613 823 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 TINF2Q9BSI4 451 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 BCO2Q9BYV7 579 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 MAN1C1Q9NR34 630 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 G3BP2Q9UN86 482 aaKnown RBP12.84□□□□□ -0.35
CAPN1-208ENST00000527323 COMMD3-BMI1R4GMX3 469 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 PDE4DIPQ5VU43 2346 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 RANBP1P43487 201 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 MSLNQ13421 630 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-208ENST00000527323 MAP7Q14244 749 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 MXD4Q14582 209 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-208ENST00000527323 KCNT2Q6UVM3 1135 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 METTL7BQ6UX53 244 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 KCNN1Q92952 543 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 AZIN2Q96A70 460 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 RTP4Q96DX8 246 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 GCOM2Q9BZD3 368 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-208ENST00000527323 MIS12Q9H081 205 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 NRDE2Q9H7Z3 1164 aa12.84□□□□□ -0.35
CAPN1-208ENST00000527323 SETD4Q9NVD3 440 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms