RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 ATL3Q6DD88 541 aa14.88□□□□□ -0.03
CPSF1-201ENST00000526271 FBXL13Q8NEE6 735 aa14.88□□□□□ -0.03
CPSF1-201ENST00000526271 UCMAQ8WVF2 138 aa14.88□□□□□ -0.03
CPSF1-201ENST00000526271 SNX19Q92543 992 aa14.88□□□□□ -0.03
CPSF1-201ENST00000526271 IMPG2Q9BZV3 1241 aa14.88□□□□□ -0.03
CPSF1-201ENST00000526271 PCED1AQ9H1Q7 454 aa14.88□□□□□ -0.03
CPSF1-201ENST00000526271 OSGEPQ9NPF4 335 aa14.88□□□□□ -0.03
CPSF1-201ENST00000526271 GGA2Q9UJY4 613 aa14.88□□□□□ -0.03
CPSF1-201ENST00000526271 PIK3R2O00459 728 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 TIMM44O43615 452 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 PCDHGA12O60330 932 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 AFF3P51826 1226 aaKnown RBP14.87□□□□□ -0.03
CPSF1-201ENST00000526271 DAOAP59103 153 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 ADGRF1Q5T601 910 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 PIK3R6Q5UE93 754 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 MSANTD2Q6P1R3 559 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 KRBA2Q6ZNG9 492 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 MMS22LQ6ZRQ5 1243 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 RSRC2Q7L4I2 434 aaKnown RBP14.87□□□□□ -0.03
CPSF1-201ENST00000526271 KAT5Q92993 513 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 SLC6A18Q96N87 628 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 CAAP1Q9H8G2 361 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 STRIP2Q9ULQ0 834 aa14.87□□□□□ -0.03
CPSF1-201ENST00000526271 HBS1LQ9Y450 684 aaKnown RBP14.87□□□□□ -0.03
CPSF1-201ENST00000526271 ASH1LQ9NR48 2969 aaKnown RBP14.86□□□□□ -0.03
CPSF1-201ENST00000526271 ATMQ13315 3056 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 PAPSS1O43252 624 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-201ENST00000526271 FSBPO95073 299 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 CYBBP04839 570 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 MYL1P05976 194 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 ACADMP11310 421 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 CD27P26842 260 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 CTSOP43234 321 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-201ENST00000526271 SYKP43405 635 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 CUL2Q13617 745 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 FNDC3BQ53EP0 1204 aaKnown RBP14.86□□□□□ -0.03
CPSF1-201ENST00000526271 FSCBQ5H9T9 825 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 PMF1Q6P1K2 205 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 IL27RAQ6UWB1 636 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 DHRS13Q6UX07 377 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 GATAD2AQ86YP4 633 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 ARHGAP18Q8N392 663 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 WFIKKN2Q8TEU8 576 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 KCTD13Q8WZ19 329 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 TMA16Q96EY4 203 aaKnown RBP14.86□□□□□ -0.03
CPSF1-201ENST00000526271 FAXDC2Q96IV6 333 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 RSPH9Q9H1X1 276 aaPredicted RBP14.86□□□□□ -0.03
CPSF1-201ENST00000526271 SCUBE2Q9NQ36 999 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 USP25Q9UHP3 1055 aa14.86□□□□□ -0.03
CPSF1-201ENST00000526271 XPO7Q9UIA9 1087 aaKnown RBP14.86□□□□□ -0.03
CPSF1-201ENST00000526271 A0A1W2PR77 199 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 SIN3BO75182 1162 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 DLDP09622 509 aaKnown RBP14.85□□□□□ -0.03
CPSF1-201ENST00000526271 KRT13P13646 458 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 RGS7P49802 495 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 METAP1P53582 386 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 BCAT1P54687 386 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 RPS24P62847 133 aaKnown RBP14.85□□□□□ -0.03
CPSF1-201ENST00000526271 EDRF1Q3B7T1 1238 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 SCML4Q8N228 414 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 SLC35F5Q8WV83 523 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 IGSF8Q969P0 613 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 TTC17Q96AE7 1141 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 LRIG1Q96JA1 1093 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 FCRL2Q96LA5 508 aaPredicted RBP14.85□□□□□ -0.03
CPSF1-201ENST00000526271 CDC6Q99741 560 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 BTBD1Q9H0C5 482 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 PABPC3Q9H361 631 aaKnown RBP14.85□□□□□ -0.03
CPSF1-201ENST00000526271 CFAP45Q9UL16 551 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 TENM4Q6N022 2769 aa14.85□□□□□ -0.03
CPSF1-201ENST00000526271 A0A087WV48 116 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 A0A1B0GTQ1 180 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 TRIM49BA6NDI0 452 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 TNFSF14O43557 240 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 TLX3O43711 291 aaPredicted RBP14.84□□□□□ -0.03
CPSF1-201ENST00000526271 TBL1XO60907 577 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 LATS1O95835 1130 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 CSKP41240 450 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 PRCPP42785 496 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 GALCP54803 685 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 BST2Q10589 180 aaKnown RBP14.84□□□□□ -0.03
CPSF1-201ENST00000526271 DNAJC3Q13217 504 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 SGO2Q562F6 1265 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 C9orf64Q5T6V5 341 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 KIAA0895LQ68EN5 471 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 KANSL1Q7Z3B3 1105 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 AHI1Q8N157 1196 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 AADATQ8N5Z0 425 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 SLC35C1Q96A29 364 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 FAM129BQ96TA1 746 aa14.84□□□□□ -0.03
CPSF1-201ENST00000526271 NUCKS1Q9H1E3 243 aaKnown RBP14.84□□□□□ -0.03
CPSF1-201ENST00000526271 COL27A1Q8IZC6 1860 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-201ENST00000526271 ZNF462Q96JM2 2506 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 A0A1W2PPC4 97 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 TTC34A8MYJ7 566 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 MID1O15344 667 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 ACSL4O60488 711 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 C1QL1O75973 258 aa14.83□□□□□ -0.04
CPSF1-201ENST00000526271 ZIC2O95409 532 aaPredicted RBP14.83□□□□□ -0.04
CPSF1-201ENST00000526271 PRB1P04280 392 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms