RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 SGSHP51688 502 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 AIF1P55008 147 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 RPL7AP62424 266 aaKnown RBP17.86■□□□□ 0.45
LMX1B-203ENST00000526117 RABGAP1LQ5R372 815 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 RAP1GAP2Q684P5 730 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 ALKBH5Q6P6C2 394 aaKnown RBP17.86■□□□□ 0.45
LMX1B-203ENST00000526117 SYT13Q7L8C5 426 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 TRMT11Q7Z4G4 463 aaKnown RBP17.86■□□□□ 0.45
LMX1B-203ENST00000526117 ANKS1BQ7Z6G8 1248 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 CHSY1Q86X52 802 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 FIBINQ8TAL6 211 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 WFIKKN2Q8TEU8 576 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 NTAN1Q96AB6 310 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 MCEEQ96PE7 176 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 TKTL2Q9H0I9 626 aa17.86■□□□□ 0.45
LMX1B-203ENST00000526117 MRPL47Q9HD33 250 aaKnown RBP17.86■□□□□ 0.45
LMX1B-203ENST00000526117 IGLV3-10A0A075B6K4 115 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 SYNJ2BP-COX16A0A087WUM0 186 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 FAM170AA1A519 330 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 TMEM191CA6NGB0 347 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 I6L893 689 aaPredicted RBP17.85■□□□□ 0.45
LMX1B-203ENST00000526117 TIMM44O43615 452 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 TSPAN3O60637 253 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 TBL1XO60907 577 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 HNRNPLP14866 589 aaKnown RBP eCLIP17.85■□□□□ 0.45
LMX1B-203ENST00000526117 DESP17661 470 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 CDC25BP30305 580 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 EIF4A3P38919 411 aaKnown RBP17.85■□□□□ 0.45
LMX1B-203ENST00000526117 CXCL12P48061 93 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 ADKP55263 362 aaKnown RBP17.85■□□□□ 0.45
LMX1B-203ENST00000526117 HDAC4P56524 1084 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 SCAPQ12770 1279 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 AUHQ13825 339 aaKnown RBP17.85■□□□□ 0.45
LMX1B-203ENST00000526117 C15orf59Q2T9L4 293 aaPredicted RBP17.85■□□□□ 0.45
LMX1B-203ENST00000526117 C10orf76Q5T2E6 689 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 DCUN1D2Q6PH85 259 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 ZNF683Q8IZ20 524 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 LGI2Q8N0V4 545 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 TC2NQ8N9U0 490 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 RPLP0P6Q8NHW5 317 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 FAM172AQ8WUF8 416 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 BHMTQ93088 406 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 ZNF653Q96CK0 615 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 LMLNQ96KR4 655 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.85■□□□□ 0.45
LMX1B-203ENST00000526117 RETREG1Q9H6L5 497 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 ANLNQ9NQW6 1124 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 COX16Q9P0S2 106 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 CNOT8Q9UFF9 292 aaKnown RBP17.85■□□□□ 0.45
LMX1B-203ENST00000526117 MMP17Q9ULZ9 603 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 HS3ST4Q9Y661 456 aa17.85■□□□□ 0.45
LMX1B-203ENST00000526117 CCDC163A0A0D9SF12 145 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 A0A1B0GVM2 712 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 TCAF2A6NFQ2 919 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 PRRT4C9JH25 899 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 TRIM24O15164 1050 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 LUC7L3O95232 432 aaKnown RBP17.84■□□□□ 0.45
LMX1B-203ENST00000526117 GJB6O95452 261 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 CYP1A2P05177 515 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 HLA-FP30511 346 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 ATXN1P54253 815 aaKnown RBP17.84■□□□□ 0.45
LMX1B-203ENST00000526117 ATP11AP98196 1134 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 SLC12A1Q13621 1099 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 ACAP1Q15027 740 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 ARL13BQ3SXY8 428 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 ARTNQ5T4W7 220 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 FBXL22Q6P050 247 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 PKN3Q6P5Z2 889 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 CHST9Q7L1S5 443 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 PHLDB2Q86SQ0 1253 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 FAM131BQ86XD5 332 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 SFTPA1Q8IWL2 248 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 CAMKK1Q8N5S9 505 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 IL17RCQ8NAC3 791 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 MYEOVQ96EZ4 313 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 NCAPGQ9BPX3 1015 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 OSBPL2Q9H1P3 480 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 CLEC4EQ9ULY5 219 aa17.84■□□□□ 0.45
LMX1B-203ENST00000526117 DRGXA6NNA5 263 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 K7ESF4 209 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 CCP110O43303 1012 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 SP9P0CG40 484 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 FECHP22830 423 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 ADRA1BP35368 520 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 NRLP54845 237 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 OXCT1P55809 520 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 RPS24P62847 133 aaKnown RBP17.83■□□□□ 0.44
LMX1B-203ENST00000526117 SATB1Q01826 763 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 ENPP2Q13822 863 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 DMC1Q14565 340 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 GEN1Q17RS7 908 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 CCDC122Q5T0U0 273 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 SH3PXD2AQ5TCZ1 1133 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 MFN1Q8IWA4 741 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 AHI1Q8N157 1196 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 FAM122AQ96E09 287 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 PANX2Q96RD6 677 aa17.83■□□□□ 0.44
LMX1B-203ENST00000526117 NHEJ1Q9H9Q4 299 aaPredicted RBP17.83■□□□□ 0.44
LMX1B-203ENST00000526117 PPARGC1AQ9UBK2 798 aaKnown RBP17.83■□□□□ 0.44
LMX1B-203ENST00000526117 GGA2Q9UJY4 613 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms