RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 B3GNT9Q6UX72 402 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 EPM2AIP1Q7L775 607 aaPredicted RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 CLNKQ7Z7G1 428 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 CCAR1Q8IX12 1150 aaKnown RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 GPRC5AQ8NFJ5 357 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 SMCR8Q8TEV9 937 aaPredicted RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 CCDC12Q8WUD4 166 aaPredicted RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 ASB10Q8WXI3 467 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 MTFMTQ96DP5 389 aaKnown RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 SLC35A4Q96G79 324 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 COQ10AQ96MF6 247 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 NAP1L5Q96NT1 182 aaPredicted RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 SIK2Q9H0K1 926 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 IKZF4Q9H2S9 585 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 RANBP17Q9H2T7 1088 aaKnown RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 UNKLQ9H9P5 680 aaKnown RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 GPR35Q9HC97 309 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 RAVER2Q9HCJ3 691 aaKnown RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 SH3GLB2Q9NR46 395 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 TESQ9UGI8 421 aaKnown RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 PACSIN3Q9UKS6 424 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 MRPL11Q9Y3B7 192 aaKnown RBP5.01□□□□□ -1.61
USP48-211ENST00000526044 RABGAP1Q9Y3P9 1069 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 PCDHA1Q9Y5I3 950 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 LOC285556D6RIA3 1793 aa5.01□□□□□ -1.61
USP48-211ENST00000526044 COL11A1P12107 1806 aaPredicted RBP5□□□□□ -1.61
USP48-211ENST00000526044 PARP14Q460N5 1801 aa5□□□□□ -1.61
USP48-211ENST00000526044 RLFQ13129 1914 aa5□□□□□ -1.61
USP48-211ENST00000526044 PRAMEF33A0A0G2JMD5 474 aa5□□□□□ -1.61
USP48-211ENST00000526044 CCDC195A0A1B0GUA6 201 aa5□□□□□ -1.61
USP48-211ENST00000526044 GRID2IPA4D2P6 1211 aa5□□□□□ -1.61
USP48-211ENST00000526044 SMCO2A6NFE2 343 aa5□□□□□ -1.61
USP48-211ENST00000526044 ZNF785A8K8V0 405 aa5□□□□□ -1.61
USP48-211ENST00000526044 H3BML4 177 aa5□□□□□ -1.61
USP48-211ENST00000526044 hCG_1984214I3L0E3 225 aa5□□□□□ -1.61
USP48-211ENST00000526044 ATP2A1O14983 1001 aa5□□□□□ -1.61
USP48-211ENST00000526044 CA12O43570 354 aa5□□□□□ -1.61
USP48-211ENST00000526044 PRAMEF10O60809 474 aa5□□□□□ -1.61
USP48-211ENST00000526044 ZFPL1O95159 310 aa5□□□□□ -1.61
USP48-211ENST00000526044 MATN4O95460 622 aa5□□□□□ -1.61
USP48-211ENST00000526044 SLC25A27O95847 323 aa5□□□□□ -1.61
USP48-211ENST00000526044 SCGB1D2O95969 90 aa5□□□□□ -1.61
USP48-211ENST00000526044 ICAM1P05362 532 aa5□□□□□ -1.61
USP48-211ENST00000526044 SYT1P21579 422 aa5□□□□□ -1.61
USP48-211ENST00000526044 FDXRP22570 491 aa5□□□□□ -1.61
USP48-211ENST00000526044 GNA11P29992 359 aa5□□□□□ -1.61
USP48-211ENST00000526044 NAPAP54920 295 aa5□□□□□ -1.61
USP48-211ENST00000526044 RPS7P62081 194 aaKnown RBP5□□□□□ -1.61
USP48-211ENST00000526044 FPGSQ05932 587 aa5□□□□□ -1.61
USP48-211ENST00000526044 SCAPQ12770 1279 aa5□□□□□ -1.61
USP48-211ENST00000526044 HABP2Q14520 560 aaPredicted RBP5□□□□□ -1.61
USP48-211ENST00000526044 LRRC41Q15345 812 aa5□□□□□ -1.61
USP48-211ENST00000526044 SAFBQ15424 915 aaKnown RBP eCLIP5□□□□□ -1.61
USP48-211ENST00000526044 GEN1Q17RS7 908 aa5□□□□□ -1.61
USP48-211ENST00000526044 USH1GQ495M9 461 aa5□□□□□ -1.61
USP48-211ENST00000526044 MAP9Q49MG5 647 aa5□□□□□ -1.61
USP48-211ENST00000526044 GALNT17Q6IS24 598 aa5□□□□□ -1.61
USP48-211ENST00000526044 Q6YL49 198 aa5□□□□□ -1.61
USP48-211ENST00000526044 PPP1R3BQ86XI6 285 aa5□□□□□ -1.61
USP48-211ENST00000526044 DENND1CQ8IV53 801 aa5□□□□□ -1.61
USP48-211ENST00000526044 CNPY4Q8N129 248 aa5□□□□□ -1.61
USP48-211ENST00000526044 ZNF713Q8N859 430 aaPredicted RBP5□□□□□ -1.61
USP48-211ENST00000526044 BRIX1Q8TDN6 353 aaKnown RBP5□□□□□ -1.61
USP48-211ENST00000526044 CAVIN3Q969G5 261 aa5□□□□□ -1.61
USP48-211ENST00000526044 PTCD3Q96EY7 689 aaKnown RBP5□□□□□ -1.61
USP48-211ENST00000526044 C8orf76Q96K31 380 aa5□□□□□ -1.61
USP48-211ENST00000526044 TAAR9Q96RI9 348 aa5□□□□□ -1.61
USP48-211ENST00000526044 PARK7Q99497 189 aaKnown RBP5□□□□□ -1.61
USP48-211ENST00000526044 ACO2Q99798 780 aaKnown RBP5□□□□□ -1.61
USP48-211ENST00000526044 SMOQ99835 787 aa5□□□□□ -1.61
USP48-211ENST00000526044 PAGR1Q9BTK6 254 aa5□□□□□ -1.61
USP48-211ENST00000526044 TOR3AQ9H497 397 aa5□□□□□ -1.61
USP48-211ENST00000526044 PSTPIP2Q9H939 334 aa5□□□□□ -1.61
USP48-211ENST00000526044 C6orf50Q9HD87 102 aa5□□□□□ -1.61
USP48-211ENST00000526044 ANLNQ9NQW6 1124 aa5□□□□□ -1.61
USP48-211ENST00000526044 SYBUQ9NX95 663 aa5□□□□□ -1.61
USP48-211ENST00000526044 BARHL2Q9NY43 387 aa5□□□□□ -1.61
USP48-211ENST00000526044 VSX1Q9NZR4 365 aaPredicted RBP5□□□□□ -1.61
USP48-211ENST00000526044 CTTNBP2NLQ9P2B4 639 aa5□□□□□ -1.61
USP48-211ENST00000526044 CCPG1Q9ULG6 757 aa5□□□□□ -1.61
USP48-211ENST00000526044 SMCHD1A6NHR9 2005 aa5□□□□□ -1.61
USP48-211ENST00000526044 ABCB11O95342 1321 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 ZNFX1Q9P2E3 1918 aaKnown RBP4.99□□□□□ -1.61
USP48-211ENST00000526044 TRGV11A0A075B6L2 103 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 A0A088AWK7 358 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 E7ENX8 843 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 E9PLN8 166 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 STX6O43752 255 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 TLR2O60603 784 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 CNMDO75829 334 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 UBXN7O94888 489 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 SUN1O94901 812 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 CALML3P27482 149 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 COPB2P35606 906 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 ANXA11P50995 505 aaKnown RBP4.99□□□□□ -1.61
USP48-211ENST00000526044 ZNF135P52742 658 aaPredicted RBP4.99□□□□□ -1.61
USP48-211ENST00000526044 CCNA1P78396 465 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 NUCB2P80303 420 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 MAP2K1Q02750 393 aaPredicted RBP4.99□□□□□ -1.61
USP48-211ENST00000526044 TAP2Q03519 686 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms