RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 IRX4P78413 519 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 TRIM61Q5EBN2 209 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 MS4A13Q5J8X5 152 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 MBLAC2Q68D91 279 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 SMYD5Q6GMV2 418 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 DPY19L2P1Q6NXN4 242 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 C11orf57Q6ZUT1 292 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-203ENST00000525013 FAM183BPQ6ZVS7 135 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 CACUL1Q86Y37 369 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 LGI2Q8N0V4 545 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 DEFB106AQ8N104 65 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 CFAP52Q8N1V2 620 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 CARNMT1Q8N4J0 409 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.24■□□□□ 0.67
CAPN1-203ENST00000525013 ZNF557Q8N988 423 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-203ENST00000525013 DDX1Q92499 740 aaKnown RBP19.24■□□□□ 0.67
CAPN1-203ENST00000525013 RNF34Q969K3 372 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 SIPA1Q96FS4 1042 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 PRICKLE1Q96MT3 831 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-203ENST00000525013 VPS16Q9H269 839 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 TMEM74BQ9NUR3 256 aa19.24■□□□□ 0.67
CAPN1-203ENST00000525013 XPO7Q9UIA9 1087 aaKnown RBP19.24■□□□□ 0.67
CAPN1-203ENST00000525013 ASCC3Q8N3C0 2202 aaKnown RBP19.24■□□□□ 0.67
CAPN1-203ENST00000525013 C4orf47A7E2U8 309 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 HSF2BPO75031 334 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 ERBB2P04626 1255 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 TPM2P07951 284 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 DPP6P42658 865 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 ZNF33AQ06730 810 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 CDH18Q13634 790 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 RAP1GAP2Q684P5 730 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 SASS6Q6UVJ0 657 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 KIAA0907Q7Z7F0 614 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-203ENST00000525013 CHSY1Q86X52 802 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 ZNF366Q8N895 744 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 FIBINQ8TAL6 211 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 PRCCQ92733 491 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-203ENST00000525013 MYEOVQ96EZ4 313 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 BTN2A3PQ96KV6 586 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 HSPA12BQ96MM6 686 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 NUSAP1Q9BXS6 441 aaKnown RBP19.23■□□□□ 0.67
CAPN1-203ENST00000525013 DDIT4Q9NX09 232 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 SLC12A6Q9UHW9 1150 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 PILRBQ9UKJ0 227 aa19.23■□□□□ 0.67
CAPN1-203ENST00000525013 TPRP12270 2363 aaKnown RBP19.23■□□□□ 0.67
CAPN1-203ENST00000525013 NUMA1Q14980 2115 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 IGLV3-25P01717 112 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 CFIP05156 583 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 DLDP09622 509 aaKnown RBP19.22■□□□□ 0.67
CAPN1-203ENST00000525013 SLC2A3P11169 496 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 ACADMP11310 421 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 UCHL3P15374 230 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 CYP11B1P15538 503 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 CD6P30203 668 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 PTPN20Q4JDL3 420 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 TAF3Q5VWG9 929 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 RBM43Q6ZSC3 357 aaKnown RBP19.22■□□□□ 0.67
CAPN1-203ENST00000525013 ATP6V0D2Q8N8Y2 350 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 TMEM35BQ8NCS4 154 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 SLC2A13Q96QE2 648 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 TMEM9BQ9NQ34 198 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.22■□□□□ 0.67
CAPN1-203ENST00000525013 ASNSD1Q9NWL6 643 aa19.22■□□□□ 0.67
CAPN1-203ENST00000525013 FAM170AA1A519 330 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 KCNU1A8MYU2 1149 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 H0Y626 953 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 ABCB4P21439 1286 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 TACR2P21452 398 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 TPMTP51580 245 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 SLC6A3Q01959 620 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 LMAN2Q12907 356 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 KRT31Q15323 416 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 PTPRNQ16849 979 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 CDKAL1Q5VV42 579 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 OLFML1Q6UWY5 402 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 METTL3Q86U44 580 aaKnown RBP19.21■□□□□ 0.67
CAPN1-203ENST00000525013 SLC41A1Q8IVJ1 513 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 RGL4Q8IZJ4 473 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 OR2T3Q8NH03 318 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 TOE1Q96GM8 510 aaKnown RBP19.21■□□□□ 0.67
CAPN1-203ENST00000525013 NAA15Q9BXJ9 866 aaKnown RBP19.21■□□□□ 0.67
CAPN1-203ENST00000525013 STK33Q9BYT3 514 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 TMEM245Q9H330 911 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 ITM2CQ9NQX7 267 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 ANO10Q9NW15 660 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 FANCLQ9NW38 375 aa19.21■□□□□ 0.67
CAPN1-203ENST00000525013 EVLQ9UI08 416 aaPredicted RBP19.21■□□□□ 0.67
CAPN1-203ENST00000525013 CACNA1EQ15878 2313 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 MUC22E2RYF6 1773 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-203ENST00000525013 F5H5T6 163 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 TM4SF5O14894 197 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 LUC7L3O95232 432 aaKnown RBP19.2■□□□□ 0.66
CAPN1-203ENST00000525013 CCR1P32246 355 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 HOXD12P35452 270 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 CSKP41240 450 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 COPAP53621 1224 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 RNASE9P60153 205 aaKnown RBP19.2■□□□□ 0.66
CAPN1-203ENST00000525013 NME3Q13232 169 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 CAMK2GQ13555 558 aaPredicted RBP19.2■□□□□ 0.66
CAPN1-203ENST00000525013 DUOXA1Q1HG43 343 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms