RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 GON4LQ3T8J9 2241 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 PCDH15Q96QU1 1955 aa7.7□□□□□ -1.18
NEDD8-203ENST00000524927 SPENQ96T58 3664 aaKnown RBP7.7□□□□□ -1.18
NEDD8-203ENST00000524927 CELSR2Q9HCU4 2923 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 PDZD2O15018 2839 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 GSTTP1A0A1W2PQM5 241 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 HRKO00198 91 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 ETV2O00321 342 aaPredicted RBP7.69□□□□□ -1.18
NEDD8-203ENST00000524927 GOLIM4O00461 696 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 NRP1O14786 923 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 ATP9AO75110 1047 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 PRPF6O94906 941 aaKnown RBP7.69□□□□□ -1.18
NEDD8-203ENST00000524927 SCGB1D2O95969 90 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 INHBBP09529 407 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 RBP3P10745 1247 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 DGKEP52429 567 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 ROM1Q03395 351 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 CCDC173Q0VFZ6 552 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 RTP5Q14D33 572 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 SLC5A9Q2M3M2 681 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 CT83Q5H943 113 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 RTL10Q7L3V2 364 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 SYT13Q7L8C5 426 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 TMPRSS12Q86WS5 348 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 SAMD3Q8N6K7 520 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 WDR48Q8TAF3 677 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 TRAPPC12Q8WVT3 735 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 SMARCD2Q92925 531 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 SLC13A1Q9BZW2 595 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.69□□□□□ -1.18
NEDD8-203ENST00000524927 TRPV4Q9HBA0 871 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 DNAJC28Q9NX36 388 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 INVSQ9Y283 1065 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 ADGRG4Q8IZF6 3080 aa7.69□□□□□ -1.18
NEDD8-203ENST00000524927 NBASA2RRP1 2371 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 PNMA6EA0A0J9YXQ4 647 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 KLHL33A6NCF5 533 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 OFD1O75665 1012 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 ATXN1LP0C7T5 689 aaKnown RBP7.68□□□□□ -1.18
NEDD8-203ENST00000524927 CEBPBP17676 345 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 ACTN2P35609 894 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 RECQLP46063 649 aaPredicted RBP7.68□□□□□ -1.18
NEDD8-203ENST00000524927 NCKAP1LP55160 1127 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 ALDH6A1Q02252 535 aaKnown RBP7.68□□□□□ -1.18
NEDD8-203ENST00000524927 TLE1Q04724 770 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 ZNF543Q08ER8 600 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 GRM4Q14833 912 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 TARBP2Q15633 366 aaKnown RBP7.68□□□□□ -1.18
NEDD8-203ENST00000524927 UGT8Q16880 541 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 LYSMD4Q5XG99 296 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 SLFN12LQ6IEE8 588 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 OR2I1PQ8NGU4 316 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 CALML6Q8TD86 181 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 TMEM209Q96SK2 561 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 CDH19Q9H159 772 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 CPNE5Q9HCH3 593 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 FSCN3Q9NQT6 498 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 STARD5Q9NSY2 213 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 CCM2LQ9NUG4 571 aaPredicted RBP7.68□□□□□ -1.18
NEDD8-203ENST00000524927 MARCH5Q9NX47 278 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 HIVEP1P15822 2718 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 TNRC6BQ9UPQ9 1833 aaKnown RBP7.68□□□□□ -1.18
NEDD8-203ENST00000524927 VWA8A3KMH1 1905 aa7.68□□□□□ -1.18
NEDD8-203ENST00000524927 CELSR1Q9NYQ6 3014 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 DOCK5Q9H7D0 1870 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 ZNF839A8K0R7 811 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 GPR32O75388 356 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 DDHD2O94830 711 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 PRLP01236 227 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 RHOP08100 348 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 SLC3A2P08195 630 aaKnown RBP7.67□□□□□ -1.18
NEDD8-203ENST00000524927 PDHBP11177 359 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 ENPP1P22413 925 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 KLRC1P26715 233 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 PTGER3P43115 390 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 MANFP55145 182 aaKnown RBP7.67□□□□□ -1.18
NEDD8-203ENST00000524927 ADCY2Q08462 1091 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 FCHO2Q0JRZ9 810 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 GRSF1Q12849 480 aaKnown RBP eCLIP7.67□□□□□ -1.18
NEDD8-203ENST00000524927 CDC37Q16543 378 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-203ENST00000524927 TMEM196Q5HYL7 178 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 RRP12Q5JTH9 1297 aaKnown RBP7.67□□□□□ -1.18
NEDD8-203ENST00000524927 LMBRD2Q68DH5 695 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-203ENST00000524927 LIPIQ6XZB0 460 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 YAF2Q8IY57 180 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 URGCPQ8TCY9 931 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 IGDCC4Q8TDY8 1250 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 JPH3Q8WXH2 748 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-203ENST00000524927 CPA5Q8WXQ8 436 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 FAM193BQ96PV7 902 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-203ENST00000524927 STRBPQ96SI9 672 aaKnown RBP7.67□□□□□ -1.18
NEDD8-203ENST00000524927 LGMNQ99538 433 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 FOXB1Q99853 325 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 RNF38Q9H0F5 515 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 QRSL1Q9H0R6 528 aaKnown RBP7.67□□□□□ -1.18
NEDD8-203ENST00000524927 CSRNP2Q9H175 543 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 NOB1Q9ULX3 412 aaKnown RBP7.67□□□□□ -1.18
NEDD8-203ENST00000524927 EDARQ9UNE0 448 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 ADAMTS9Q9P2N4 1935 aa7.67□□□□□ -1.18
NEDD8-203ENST00000524927 PRSS38A1L453 326 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms