RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 PLXNA3P51805 1871 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 E9PAM4 449 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 SGK1O00141 431 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 MCF2LO15068 1137 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 ENDOD1O94919 500 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 KLKB1P03952 638 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 PPP3CCP48454 512 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 IRAK1P51617 712 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 NRLP54845 237 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 ZXDBP98169 803 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 PPP2R5DQ14738 602 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 MS4A13Q5J8X5 152 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 SYCP2LQ5T4T6 812 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 ZSCAN18Q8TBC5 510 aaPredicted RBP9.65□□□□□ -0.87
SDCBP-212ENST00000523483 PGAP3Q96FM1 320 aaPredicted RBP9.65□□□□□ -0.87
SDCBP-212ENST00000523483 CEP295NLQ96MC4 621 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 LRRC1Q9BTT6 524 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 ADAM7Q9H2U9 754 aa9.65□□□□□ -0.87
SDCBP-212ENST00000523483 ZSCAN5CA6NGD5 496 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-212ENST00000523483 C3orf70A6NLC5 250 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-212ENST00000523483 TTI1O43156 1089 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 PRAMEF12O95522 483 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 IGLV3-25P01717 112 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 IL4RP24394 825 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 VIPR2P41587 438 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 EIF3EP60228 445 aaKnown RBP9.64□□□□□ -0.87
SDCBP-212ENST00000523483 ATAT1Q5SQI0 421 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 FBXL22Q6P050 247 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 DARS2Q6PI48 645 aaKnown RBP9.64□□□□□ -0.87
SDCBP-212ENST00000523483 LEKR1Q6ZMV7 388 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 CMTM8Q8IZV2 173 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 RASGEF1CQ8N431 466 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 HDAC7Q8WUI4 952 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 MYLIPQ8WY64 445 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 NTAN1Q96AB6 310 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 ZNF670Q9BS34 389 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 LRRC3Q9BY71 257 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 DPH5Q9H2P9 285 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 PRO3102Q9H379 93 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 ZNF197O14709 1029 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 CNTN5O94779 1100 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 RBP3P10745 1247 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 KCNA5P22460 613 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 FSHRP23945 695 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 WEE1P30291 646 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 KPNA1P52294 538 aaPredicted RBP9.64□□□□□ -0.87
SDCBP-212ENST00000523483 AP1B1Q10567 949 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 BEND5Q7L4P6 421 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 DDI1Q8WTU0 396 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 IFT81Q8WYA0 676 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 TRIM51Q9BSJ1 452 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 AGO1Q9UL18 857 aaKnown RBP9.64□□□□□ -0.87
SDCBP-212ENST00000523483 HBS1LQ9Y450 684 aaKnown RBP9.64□□□□□ -0.87
SDCBP-212ENST00000523483 MFSD11O43934 449 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 ACSL4O60488 711 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 ALFQ53S48 1182 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 BBS7Q8IWZ6 715 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 PQLC3Q8N755 202 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 PLD5Q8N7P1 536 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 RSAD2Q8WXG1 361 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 FGF13Q92913 245 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 TBC1D31Q96DN5 1066 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 SLC39A13Q96H72 371 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 SPON2Q9BUD6 331 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 TASP1Q9H6P5 420 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 TDP1Q9NUW8 608 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 NDFIP2Q9NV92 336 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 ASIC3Q9UHC3 531 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 MTCH2Q9Y6C9 303 aa9.64□□□□□ -0.87
SDCBP-212ENST00000523483 LEFTY2O00292 366 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 RAD51CO43502 376 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 TBX10O75333 385 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 TACR2P21452 398 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 MLLT6P55198 1093 aaPredicted RBP9.63□□□□□ -0.87
SDCBP-212ENST00000523483 COPS2P61201 443 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 DR1Q01658 176 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 BYSLQ13895 437 aaKnown RBP9.63□□□□□ -0.87
SDCBP-212ENST00000523483 ANO4Q32M45 955 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 SYCE2Q6PIF2 218 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 TTC8Q8TAM2 541 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 MAIP1Q8WWC4 291 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 IGSF8Q969P0 613 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 MYEOVQ96EZ4 313 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 ZFYVE19Q96K21 471 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 LGMNQ99538 433 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 CDCA3Q99618 268 aaPredicted RBP9.63□□□□□ -0.87
SDCBP-212ENST00000523483 ARHGEF38Q9NXL2 777 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 TTC7AQ9ULT0 858 aaPredicted RBP9.63□□□□□ -0.87
SDCBP-212ENST00000523483 NEBLO76041 1014 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 OR1E1P30953 314 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 HOXA9P31269 272 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 SLC6A4P31645 630 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 GUCY2DQ02846 1103 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 HLTFQ14527 1009 aaKnown RBP eCLIP9.63□□□□□ -0.87
SDCBP-212ENST00000523483 PPP2R5EQ16537 467 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 TTC27Q6P3X3 843 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 BBS12Q6ZW61 710 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 CARNMT1Q8N4J0 409 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 EFHBQ8N7U6 833 aa9.63□□□□□ -0.87
SDCBP-212ENST00000523483 CCDC89Q8N998 374 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms