RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 A0A1B0GTQ1 180 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 YJEFN3A6XGL0 299 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 E7ENQ6 273 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 MSI1O43347 362 aaKnown RBP23.67■■□□□ 1.38
PVT1-218ENST00000523328 DFNA5O60443 496 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 ATP5BP06576 529 aaKnown RBP23.67■■□□□ 1.38
PVT1-218ENST00000523328 PRR29P0C7W0 189 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 RPL13P26373 211 aaKnown RBP23.67■■□□□ 1.38
PVT1-218ENST00000523328 CD70P32970 193 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 MXI1P50539 228 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 RACK1P63244 317 aaKnown RBP23.67■■□□□ 1.38
PVT1-218ENST00000523328 ADIGQ0VDE8 80 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 ZCWPW2Q504Y3 356 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 KIAA0895LQ68EN5 471 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 TMPRSS12Q86WS5 348 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 RSPH9Q9H1X1 276 aaPredicted RBP23.67■■□□□ 1.38
PVT1-218ENST00000523328 LRRC4Q9HBW1 653 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 SUN2Q9UH99 717 aa23.67■■□□□ 1.38
PVT1-218ENST00000523328 A0A1W2PPC4 97 aa23.66■■□□□ 1.38
PVT1-218ENST00000523328 VILLO15195 856 aa23.66■■□□□ 1.38
PVT1-218ENST00000523328 POLR2EP19388 210 aaKnown RBP23.66■■□□□ 1.38
PVT1-218ENST00000523328 CMA1P23946 247 aa23.66■■□□□ 1.38
PVT1-218ENST00000523328 PKP1Q13835 747 aa23.66■■□□□ 1.38
PVT1-218ENST00000523328 INAVAQ3KP66 663 aa23.66■■□□□ 1.38
PVT1-218ENST00000523328 MPP7Q5T2T1 576 aa23.66■■□□□ 1.38
PVT1-218ENST00000523328 PIK3R6Q5UE93 754 aa23.66■■□□□ 1.38
PVT1-218ENST00000523328 USP30Q70CQ3 517 aa23.66■■□□□ 1.38
PVT1-218ENST00000523328 GUF1Q8N442 669 aaKnown RBP23.66■■□□□ 1.38
PVT1-218ENST00000523328 IPO9Q96P70 1041 aaKnown RBP23.66■■□□□ 1.38
PVT1-218ENST00000523328 ACE2Q9BYF1 805 aaPredicted RBP23.66■■□□□ 1.38
PVT1-218ENST00000523328 PABPC3Q9H361 631 aaKnown RBP23.66■■□□□ 1.38
PVT1-218ENST00000523328 ABCC13Q9NSE7 274 aa23.66■■□□□ 1.38
PVT1-218ENST00000523328 MYLKQ15746 1914 aa23.66■■□□□ 1.38
PVT1-218ENST00000523328 NYNRINQ9P2P1 1898 aaKnown RBP23.65■■□□□ 1.38
PVT1-218ENST00000523328 EIF4E1BA6NMX2 242 aaKnown RBP23.65■■□□□ 1.38
PVT1-218ENST00000523328 PLK4O00444 970 aa23.65■■□□□ 1.38
PVT1-218ENST00000523328 BST2Q10589 180 aaKnown RBP23.65■■□□□ 1.38
PVT1-218ENST00000523328 PRAMEF14Q5SWL7 426 aa23.65■■□□□ 1.38
PVT1-218ENST00000523328 RFWD3Q6PCD5 774 aa23.65■■□□□ 1.38
PVT1-218ENST00000523328 GATAD2AQ86YP4 633 aa23.65■■□□□ 1.38
PVT1-218ENST00000523328 LMLNQ96KR4 655 aa23.65■■□□□ 1.38
PVT1-218ENST00000523328 SLC6A18Q96N87 628 aa23.65■■□□□ 1.38
PVT1-218ENST00000523328 EBF2Q9HAK2 575 aa23.65■■□□□ 1.38
PVT1-218ENST00000523328 SERGEFQ9UGK8 458 aa23.65■■□□□ 1.38
PVT1-218ENST00000523328 SCML1Q9UN30 329 aa23.65■■□□□ 1.38
PVT1-218ENST00000523328 PCDHGA1Q9Y5H4 931 aa23.65■■□□□ 1.38
PVT1-218ENST00000523328 C10orf142B7Z368 130 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 TBL1XO60907 577 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 IGLV3-27P01718 113 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 WNT1P04628 370 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 SLC6A4P31645 630 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 ABCG1P45844 678 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 GALCP54803 685 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 C21orf59P57076 290 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 DPYDQ12882 1025 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 SGO2Q562F6 1265 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 FAM133BQ5BKY9 247 aaKnown RBP23.64■■□□□ 1.37
PVT1-218ENST00000523328 MSANTD2Q6P1R3 559 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 SCML4Q8N228 414 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 KCTD13Q8WZ19 329 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 EEF2KMTQ96G04 330 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 DCBLD2Q96PD2 775 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 ELF4Q99607 663 aaPredicted RBP23.64■■□□□ 1.37
PVT1-218ENST00000523328 IRX2Q9BZI1 471 aaPredicted RBP23.64■■□□□ 1.37
PVT1-218ENST00000523328 FBXL12Q9NXK8 326 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 NCKAP1Q9Y2A7 1128 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 ARID1BQ8NFD5 2236 aaPredicted RBP23.64■■□□□ 1.37
PVT1-218ENST00000523328 PTPRQQ9UMZ3 2332 aa23.64■■□□□ 1.37
PVT1-218ENST00000523328 SETXQ7Z333 2677 aaKnown RBP23.63■■□□□ 1.37
PVT1-218ENST00000523328 GOLGA6L7A0A1B0GV03 622 aa23.63■■□□□ 1.37
PVT1-218ENST00000523328 FAM47DPA6NHR8 397 aa23.63■■□□□ 1.37
PVT1-218ENST00000523328 CBX4O00257 560 aa23.63■■□□□ 1.37
PVT1-218ENST00000523328 CLDN6P56747 220 aa23.63■■□□□ 1.37
PVT1-218ENST00000523328 DAOAP59103 153 aa23.63■■□□□ 1.37
PVT1-218ENST00000523328 SHBQ15464 509 aa23.63■■□□□ 1.37
PVT1-218ENST00000523328 NCEH1Q6PIU2 408 aa23.63■■□□□ 1.37
PVT1-218ENST00000523328 UBA3Q8TBC4 463 aa23.63■■□□□ 1.37
PVT1-218ENST00000523328 CCDC47Q96A33 483 aaKnown RBP23.63■■□□□ 1.37
PVT1-218ENST00000523328 TTC17Q96AE7 1141 aa23.63■■□□□ 1.37
PVT1-218ENST00000523328 CNGB3Q9NQW8 809 aa23.63■■□□□ 1.37
PVT1-218ENST00000523328 HESX1Q9UBX0 185 aa23.63■■□□□ 1.37
PVT1-218ENST00000523328 ENC1O14682 589 aa23.62■■□□□ 1.37
PVT1-218ENST00000523328 SIN3BO75182 1162 aa23.62■■□□□ 1.37
PVT1-218ENST00000523328 GABBR2O75899 941 aa23.62■■□□□ 1.37
PVT1-218ENST00000523328 HNRNPA1L2Q32P51 320 aaKnown RBP23.62■■□□□ 1.37
PVT1-218ENST00000523328 EDRF1Q3B7T1 1238 aa23.62■■□□□ 1.37
PVT1-218ENST00000523328 PKDCCQ504Y2 493 aa23.62■■□□□ 1.37
PVT1-218ENST00000523328 SIX6OS1Q8N1H7 587 aa23.62■■□□□ 1.37
PVT1-218ENST00000523328 ADAM32Q8TC27 787 aa23.62■■□□□ 1.37
PVT1-218ENST00000523328 SAP25Q8TEE9 199 aa23.62■■□□□ 1.37
PVT1-218ENST00000523328 GANCQ8TET4 914 aa23.62■■□□□ 1.37
PVT1-218ENST00000523328 MRGPRX3Q96LB0 322 aa23.62■■□□□ 1.37
PVT1-218ENST00000523328 UBL7Q96S82 380 aaPredicted RBP23.62■■□□□ 1.37
PVT1-218ENST00000523328 INTS6Q9UL03 887 aaKnown RBP23.62■■□□□ 1.37
PVT1-218ENST00000523328 O00370 1275 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 MID1O15344 667 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 IRAK2O43187 625 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 ITPKBP27987 946 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 DNAJC3Q13217 504 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 CUL2Q13617 745 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms