RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 SP100P23497 879 aaPredicted RBP13.83□□□□□ -0.2
CLK4-210ENST00000522136 ARL4AP40617 200 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 MTHFRP42898 656 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 VCPP55072 806 aaKnown RBP13.83□□□□□ -0.2
CLK4-210ENST00000522136 TPI1P60174 286 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 COPS2P61201 443 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 LONRF2Q1L5Z9 754 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 EYSQ5T1H1 3165 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 MANEALQ5VSG8 457 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 RWDD4Q6NW29 188 aaKnown RBP13.83□□□□□ -0.2
CLK4-210ENST00000522136 FBXL22Q6P050 247 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 RFX8Q6ZV50 586 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 HTR3DQ70Z44 454 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 DENND4AQ7Z401 1863 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 CHSY1Q86X52 802 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 BBS7Q8IWZ6 715 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 ZNF683Q8IZ20 524 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 ASB16Q96NS5 453 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 ZNF670Q9BS34 389 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 ETNK2Q9NVF9 386 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 MYOFQ9NZM1 2061 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 MPP6Q9NZW5 540 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 NEU3Q9UQ49 428 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 NR2E1Q9Y466 385 aa13.83□□□□□ -0.2
CLK4-210ENST00000522136 NUP205Q92621 2012 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 DOCK4Q8N1I0 1966 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 H3BRJ5 948 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 TSPAN3O60637 253 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 EPHB2P29323 1055 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 GBP2P32456 591 aaPredicted RBP13.82□□□□□ -0.2
CLK4-210ENST00000522136 CETN2P41208 172 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 ZNF77Q15935 545 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 PPP2R5EQ16537 467 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 CCDC181Q5TID7 509 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 LGI2Q8N0V4 545 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 CFAP52Q8N1V2 620 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 PQLC3Q8N755 202 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 NETO2Q8NC67 525 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 ACTRT1Q8TDG2 376 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 SUSD6Q92537 303 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 IGSF8Q969P0 613 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 FAF2Q96CS3 445 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 EPAS1Q99814 870 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 AP1M1Q9BXS5 423 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 MAK16Q9BXY0 300 aaKnown RBP13.82□□□□□ -0.2
CLK4-210ENST00000522136 DCLK3Q9C098 648 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 GDE1Q9NZC3 331 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 SAE1Q9UBE0 346 aaPredicted RBP13.82□□□□□ -0.2
CLK4-210ENST00000522136 ZMYM5Q9UJ78 669 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 LSM7Q9UK45 103 aaKnown RBP13.82□□□□□ -0.2
CLK4-210ENST00000522136 PGRMC1O00264 195 aaKnown RBP13.82□□□□□ -0.2
CLK4-210ENST00000522136 DAPK3O43293 454 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 CST8O60676 142 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 ERCC2P18074 760 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 PTPN7P35236 360 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 SGSHP51688 502 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 DPYSQ14117 519 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 ADGRF1Q5T601 910 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 CIR1Q86X95 450 aaPredicted RBP13.82□□□□□ -0.2
CLK4-210ENST00000522136 DDX42Q86XP3 938 aaKnown RBP eCLIP13.82□□□□□ -0.2
CLK4-210ENST00000522136 SMARCD2Q92925 531 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 AZIN2Q96A70 460 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 HAUS1Q96CS2 278 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 FAM118BQ9BPY3 351 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 ARHGEF4Q9NR80 690 aa13.82□□□□□ -0.2
CLK4-210ENST00000522136 E2F8A0AVK6 867 aa13.81□□□□□ -0.2
CLK4-210ENST00000522136 CNTN5O94779 1100 aa13.81□□□□□ -0.2
CLK4-210ENST00000522136 NRG1Q02297 640 aaPredicted RBP13.81□□□□□ -0.2
CLK4-210ENST00000522136 USP4Q13107 963 aa13.81□□□□□ -0.2
CLK4-210ENST00000522136 KLF1Q13351 362 aaPredicted RBP13.81□□□□□ -0.2
CLK4-210ENST00000522136 NPNTQ6UXI9 565 aa13.81□□□□□ -0.2
CLK4-210ENST00000522136 CELF5Q8N6W0 485 aaKnown RBP13.81□□□□□ -0.2
CLK4-210ENST00000522136 TBC1D31Q96DN5 1066 aa13.81□□□□□ -0.2
CLK4-210ENST00000522136 P2RY11Q96G91 374 aa13.81□□□□□ -0.2
CLK4-210ENST00000522136 PRICKLE1Q96MT3 831 aaPredicted RBP13.81□□□□□ -0.2
CLK4-210ENST00000522136 RPRD1AQ96P16 312 aaPredicted RBP13.81□□□□□ -0.2
CLK4-210ENST00000522136 LINC00597Q9H2U6 94 aa13.81□□□□□ -0.2
CLK4-210ENST00000522136 RCOR3Q9P2K3 495 aaPredicted RBP13.81□□□□□ -0.2
CLK4-210ENST00000522136 STOML2Q9UJZ1 356 aa13.81□□□□□ -0.2
CLK4-210ENST00000522136 TTC7AQ9ULT0 858 aaPredicted RBP13.81□□□□□ -0.2
CLK4-210ENST00000522136 R3HDM2Q9Y2K5 976 aaKnown RBP13.81□□□□□ -0.2
CLK4-210ENST00000522136 F5H5T6 163 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 MAP3K6O95382 1288 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 LAMP2P13473 410 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 FCARP24071 287 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 WEE1P30291 646 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 PAFAH1B1P43034 410 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 HCAR3P49019 387 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 RPS24P62847 133 aaKnown RBP13.8□□□□□ -0.2
CLK4-210ENST00000522136 TUBB2AQ13885 445 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 SIX1Q15475 284 aaPredicted RBP13.8□□□□□ -0.2
CLK4-210ENST00000522136 WHAMMP3Q1A5X7 153 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 ALFQ53S48 1182 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 TANGO2Q6ICL3 276 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 C1orf228Q6PIY5 440 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 LRRC31Q6UY01 552 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 BBS12Q6ZW61 710 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 VSIG1Q86XK7 387 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 CCDC33Q8N5R6 958 aa13.8□□□□□ -0.2
CLK4-210ENST00000522136 PLD5Q8N7P1 536 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms