RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 BFSP2Q13515 415 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 MEA1Q16626 185 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 SPDYAQ5MJ70 313 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 ABHD17BQ5VST6 288 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 NAPEPLDQ6IQ20 393 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 CRIP3Q6Q6R5 217 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 TMTC3Q6ZXV5 915 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 PARS2Q7L3T8 475 aaKnown RBP3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 C1orf210Q8IVY1 113 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 C12orf76Q8N812 135 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 NGDNQ8NEJ9 315 aaKnown RBP3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 SNRNP27Q8WVK2 155 aaKnown RBP3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 STAMQ92783 540 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 ATP2A3Q93084 1043 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 RNFT2Q96EX2 444 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZNF503Q96F45 646 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 FAR2Q96K12 515 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 NR1H4Q96RI1 486 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 AIFM2Q9BRQ8 373 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 ZNF747Q9BV97 191 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 DPCDQ9BVM2 203 aaPredicted RBP3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 WDR11Q9BZH6 1224 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBCCD1Q9NVR7 557 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 ASIC5Q9NY37 505 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 TBC1D14Q9P2M4 693 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 MGAT4CQ9UBM8 478 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 PIAS3Q9Y6X2 628 aa3.83□□□□□ -1.8
HMGN1P28-201ENST00000521340 SPATA31A1Q5TZJ5 1347 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 DYTNA2CJ06 578 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 PI4KAP2A4QPH2 592 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 SH2D7A6NKC9 451 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 H0YIZ8 118 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 PRYO14603 147 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 TNFSF14O43557 240 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 TMPRSS11DO60235 418 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 TULP3O75386 442 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 SGPL1O95470 568 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 CHRM2P08172 466 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 PRPH2P23942 346 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 FPR3P25089 353 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 HOXD13P35453 343 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 MTHFSP49914 203 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 AGTR2P50052 363 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 DGCR2P98153 550 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 CFHR3Q02985 330 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 CDK18Q07002 472 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 FOXI1Q12951 378 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 PRKG2Q13237 762 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 CAMK1Q14012 370 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 KRT32Q14532 448 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 P3H1Q32P28 736 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 USP39Q53GS9 565 aaKnown RBP3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 TEDDM1Q5T9Z0 273 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 NAA35Q5VZE5 725 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 HAUS3Q68CZ6 603 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 ANKRD40Q6AI12 368 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 MTHFD1LQ6UB35 978 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 Q6ZPA2 131 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 C4orf50Q6ZRC1 276 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 RNF207Q6ZRF8 634 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 FASTKD5Q7L8L6 764 aaKnown RBP3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 R3HCC1LQ7Z5L2 792 aaKnown RBP3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 CHD1LQ86WJ1 897 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 SFTPA1Q8IWL2 248 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 ADGRF3Q8IZF5 1079 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 TOR1AIP2Q8NFQ8 470 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 XAGE5Q8WWM1 108 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 RBM17Q96I25 401 aaKnown RBP3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 LMAN2LQ9H0V9 348 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 TMX4Q9H1E5 349 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 GHITMQ9H3K2 345 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 DEF6Q9H4E7 631 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 BRF2Q9HAW0 419 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 PARPBPQ9NWS1 579 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 FOXJ2Q9P0K8 574 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 ORC3Q9UBD5 711 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 AMFRQ9UKV5 643 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 ARHGAP26Q9UNA1 814 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 B3GNT3Q9Y2A9 372 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 GDAQ9Y2T3 454 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 TCAF1Q9Y4C2 921 aa3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 EPN1Q9Y6I3 576 aaPredicted RBP3.82□□□□□ -1.8
HMGN1P28-201ENST00000521340 RSF1Q96T23 1441 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 GOLGA6L10A0A0M3HER8 536 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 TCRBV5S1A1TA0A578 114 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 NPIPB15A6NHN6 443 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 PSMD9O00233 223 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 C1RP00736 705 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 URODP06132 367 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 RFPL3SP0C7P2 107 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 NR2F6P10588 404 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 MYCLP12524 364 aaPredicted RBP3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 MATN1P21941 496 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 ICAM3P32942 547 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 GRK5P34947 590 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 GGT5P36269 586 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 MTNR1AP48039 350 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 CCR9P51686 369 aa3.81□□□□□ -1.8
HMGN1P28-201ENST00000521340 JAK3P52333 1124 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms