RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, human

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-222	ENST00000520948	CNOT8	Q9UFF9	292 aa	Known RBP	18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	LSM7	Q9UK45	103 aa	Known RBP	18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	STAP1	Q9ULZ2	295 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	ANKRD62	A6NC57	917 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	TMEM191C	A6NGB0	347 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948		M0QYT0	321 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	GFRA2	O00451	464 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	SCAMP3	O14828	347 aa	Known RBP	18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	AKR1B10	O60218	316 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	ATG13	O75143	517 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	LATS1	O95835	1130 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	CYP1A2	P05177	515 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	PDGFRA	P16234	1089 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	CORO1A	P31146	461 aa	Known RBP	18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	IFNAR2	P48551	515 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	IL31	Q6EBC2	164 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	DNAJC24	Q6P3W2	148 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	RHBDF2	Q6PJF5	856 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	TMTC1	Q8IUR5	882 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	DENND1C	Q8IV53	801 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	UNC45B	Q8IWX7	931 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	CCDC170	Q8IYT3	715 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	ZNF653	Q96CK0	615 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	CFAP57	Q96MR6	1250 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	THAP2	Q9H0W7	228 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	DEF6	Q9H4E7	631 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	SMOC1	Q9H4F8	434 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	ECT2	Q9H8V3	914 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	SPTLC3	Q9NUV7	552 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	TMEM51	Q9NW97	253 aa		18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	18.83	■□□□□ 0.6	2e-7	■■■■□ 22.2
VEGFA-222	ENST00000520948	TPR	P12270	2363 aa	Known RBP	18.83	■□□□□ 0.6
VEGFA-222	ENST00000520948	KCNU1	A8MYU2	1149 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	ATMIN	O43313	823 aa	Predicted RBP	18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	FOXD2	O60548	495 aa	Predicted RBP	18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	EPN2	O95208	641 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	GJA4	P35212	333 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	HARS2	P49590	506 aa	Known RBP	18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	CXCR3	P49682	368 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	SULT1E1	P49888	294 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	GALK1	P51570	392 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	GAB4	Q2WGN9	574 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	NUGGC	Q68CJ6	796 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	CPXM2	Q8N436	756 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	ATP2A3	Q93084	1043 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	P2RY13	Q9BPV8	354 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	PIGV	Q9NUD9	493 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	DDIT4	Q9NX09	232 aa		18.82	■□□□□ 0.6
VEGFA-222	ENST00000520948	ACACB	O00763	2458 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	EPG5	Q9HCE0	2579 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	NFATC1	O95644	943 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	F9	P00740	461 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	CYP17A1	P05093	508 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	ABCB4	P21439	1286 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	GPD1	P21695	349 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	ZNF143	P52747	638 aa	Predicted RBP	18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	AMPD2	Q01433	879 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	OGDH	Q02218	1023 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	GSE1	Q14687	1217 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	DHCR24	Q15392	516 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	RAB6C	Q53S08	254 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	SH3PXD2A	Q5TCZ1	1133 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	STRADA	Q7RTN6	431 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	CPA6	Q8N4T0	437 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	RPLP0P6	Q8NHW5	317 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	ARHGEF26	Q96DR7	871 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	MCEE	Q96PE7	176 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	PACSIN1	Q9BY11	444 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	RAB6C	Q9H0N0	254 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	FAM204A	Q9H8W3	233 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	SPHK2	Q9NRA0	654 aa		18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	KMT2B	Q9UMN6	2715 aa	Predicted RBP	18.81	■□□□□ 0.6
VEGFA-222	ENST00000520948	CCDC163	A0A0D9SF12	145 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	ACSL4	O60488	711 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	ZNF806	P0C7X5	589 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	SLC2A3	P11169	496 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	DRD1	P21728	446 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	SDC4	P31431	198 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	CCR1	P32246	355 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	CHKA	P35790	457 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	DEUP1	Q05D60	604 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	NME3	Q13232	169 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	ST3GAL2	Q16842	350 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	C15orf59	Q2T9L4	293 aa	Predicted RBP	18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	LY6G5C	Q5SRR4	150 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	C10orf76	Q5T2E6	689 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	ADGRF1	Q5T601	910 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	NADSYN1	Q6IA69	706 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	TMEM25	Q86YD3	366 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	FNIP1	Q8TF40	1166 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	EZH1	Q92800	747 aa	Predicted RBP	18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	P2RY11	Q96G91	374 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	LOXL4	Q96JB6	756 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	BAG1	Q99933	345 aa	Predicted RBP	18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	MRPL47	Q9HD33	250 aa	Known RBP	18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	ARHGEF38	Q9NXL2	777 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	MARK1	Q9P0L2	795 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	MYO1A	Q9UBC5	1043 aa		18.8	■□□□□ 0.6
VEGFA-222	ENST00000520948	EPN1	Q9Y6I3	576 aa	Predicted RBP	18.8	■□□□□ 0.6

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