RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 ITGB6P18564 788 aa12.15□□□□□ -0.46
PCDHGB6-201ENST00000520790 MAPK8P45983 427 aa12.15□□□□□ -0.46
PCDHGB6-201ENST00000520790 PDAP1Q13442 181 aaKnown RBP12.15□□□□□ -0.46
PCDHGB6-201ENST00000520790 ZSCAN26Q16670 478 aa12.15□□□□□ -0.46
PCDHGB6-201ENST00000520790 LY6G5CQ5SRR4 150 aa12.15□□□□□ -0.46
PCDHGB6-201ENST00000520790 CABS1Q96KC9 395 aa12.15□□□□□ -0.46
PCDHGB6-201ENST00000520790 CDCA3Q99618 268 aaPredicted RBP12.15□□□□□ -0.46
PCDHGB6-201ENST00000520790 TPSD1Q9BZJ3 242 aa12.15□□□□□ -0.46
PCDHGB6-201ENST00000520790 ADAMTS10Q9H324 1103 aa12.15□□□□□ -0.46
PCDHGB6-201ENST00000520790 SOHLH2Q9NX45 425 aa12.15□□□□□ -0.46
PCDHGB6-201ENST00000520790 TAF1P21675 1872 aa12.15□□□□□ -0.46
PCDHGB6-201ENST00000520790 MSH3P20585 1137 aa12.15□□□□□ -0.47
PCDHGB6-201ENST00000520790 SLCO1A2P46721 670 aa12.15□□□□□ -0.47
PCDHGB6-201ENST00000520790 SULT2A1Q06520 285 aa12.15□□□□□ -0.47
PCDHGB6-201ENST00000520790 ANKRD33Q7Z3H0 272 aa12.15□□□□□ -0.47
PCDHGB6-201ENST00000520790 SPATA20Q8TB22 786 aa12.15□□□□□ -0.47
PCDHGB6-201ENST00000520790 SMARCD2Q92925 531 aa12.15□□□□□ -0.47
PCDHGB6-201ENST00000520790 SMC6Q96SB8 1091 aa12.15□□□□□ -0.47
PCDHGB6-201ENST00000520790 UPF3AQ9H1J1 476 aaKnown RBP12.15□□□□□ -0.47
PCDHGB6-201ENST00000520790 DPEP2Q9H4A9 486 aa12.15□□□□□ -0.47
PCDHGB6-201ENST00000520790 CCSER2Q9H7U1 834 aa12.15□□□□□ -0.47
PCDHGB6-201ENST00000520790 ZMYM5Q9UJ78 669 aa12.15□□□□□ -0.47
PCDHGB6-201ENST00000520790 HEATR9A2RTY3 570 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 CCDC160A6NGH7 325 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 MAN2B1O00754 1011 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 GPR32O75388 356 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 SEC31AO94979 1220 aaKnown RBP12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 HNRNPA1P09651 372 aaKnown RBP eCLIP12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 LIG3P49916 1009 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 GEMP55040 296 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 SOWAHAQ2M3V2 549 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 HYIQ5T013 277 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 MRPL43Q8N983 215 aaKnown RBP12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 E2F7Q96AV8 911 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 MFSD14AQ96MC6 490 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 DUSP9Q99956 384 aaKnown RBP12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 NTPCRQ9BSD7 190 aaKnown RBP12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 TNKS2Q9H2K2 1166 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 TDRKHQ9Y2W6 561 aaKnown RBP12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 CACNB4O00305 520 aaPredicted RBP12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 MT-ND3P03897 115 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 ERVK-10P10266 1014 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 TUBB2AQ13885 445 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 CLLU1OSQ5K130 101 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 USP45Q70EL2 814 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 ANKS1BQ7Z6G8 1248 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 MRPL38Q96DV4 380 aaKnown RBP12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 UHRF1Q96T88 793 aaPredicted RBP12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 P2RY13Q9BPV8 354 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 TUBB2BQ9BVA1 445 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 ARFGEF2Q9Y6D5 1785 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 CPED1A4D0V7 1026 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 HIDE1A8MVS5 230 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 O00370 1275 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 PAGE1O75459 146 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 CLEC16AQ2KHT3 1053 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 AASDHQ4L235 1098 aaPredicted RBP12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 NRSN1Q8IZ57 195 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 ALLCQ8N6M5 410 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 TBCBQ99426 244 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 FICDQ9BVA6 458 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 PRKD2Q9BZL6 878 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 ATP13A3Q9H7F0 1226 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 TBX21Q9UL17 535 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 COG5Q9UP83 839 aa12.14□□□□□ -0.47
PCDHGB6-201ENST00000520790 SSU72P8A0A1W2PR75 194 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 SYNDIG1LA6NDD5 238 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 NVLO15381 856 aaKnown RBP12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 PSMD3O43242 534 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 PPP3CCP48454 512 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 RGS4P49798 205 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 FBXW4P57775 412 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 C2orf54Q08AI8 447 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 BOP1Q14137 746 aaKnown RBP12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 LBRQ14739 615 aaKnown RBP12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 SLC9A9Q8IVB4 645 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 CCNYL1Q8N7R7 359 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 BTN2A3PQ96KV6 586 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 CAPN10Q9HC96 672 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 EXOC1LA0A1B0GW35 172 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 BUD23O43709 281 aaKnown RBP12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 TMEM253P0C7T8 217 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 RFC1P35251 1148 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 MMP13P45452 471 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 C1QBPQ07021 282 aaKnown RBP12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 NPY5RQ15761 445 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 EOGTQ5NDL2 527 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 CIR1Q86X95 450 aaPredicted RBP12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 CXorf40BQ96DE9 158 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 BPIFA3Q9BQP9 254 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 ZCCHC2Q9C0B9 1178 aaKnown RBP12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 ARHGEF38Q9NXL2 777 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 LNPEPQ9UIQ6 1025 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 GTPBP10A4D1E9 387 aaKnown RBP12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 LCHNA4D1U4 455 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 INPP4BO15327 924 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 HCRTO43612 131 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 ACSL4O60488 711 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 MIPP30301 263 aa12.13□□□□□ -0.47
PCDHGB6-201ENST00000520790 ERVFC1P60507 584 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms