RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 PARP6Q2NL67 630 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 CASC4Q6P4E1 433 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 SMARCD1Q96GM5 515 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 KANSL3Q9P2N6 904 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 TDRD15B5MCY1 1934 aaKnown RBP26.48■■□□□ 1.83
COL13A1-213ENST00000520267 UNC5CO95185 931 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 BRCC3P46736 316 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 SERPINB4P48594 390 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 AIF1P55008 147 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 MROH9Q5TGP6 573 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 ARNTL2Q8WYA1 636 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 PGAP3Q96FM1 320 aaPredicted RBP26.48■■□□□ 1.83
COL13A1-213ENST00000520267 FERMT1Q9BQL6 677 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 TSSK1BQ9BXA7 367 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 SLC13A1Q9BZW2 595 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 IQCGQ9H095 443 aaKnown RBP26.48■■□□□ 1.83
COL13A1-213ENST00000520267 SPC25Q9HBM1 224 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 SDR42E2A6NKP2 422 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 KCNK1O00180 336 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 MYCNP04198 464 aaPredicted RBP26.48■■□□□ 1.83
COL13A1-213ENST00000520267 TROVE2P10155 538 aaKnown RBP eCLIP26.48■■□□□ 1.83
COL13A1-213ENST00000520267 PCSK1P29120 753 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 SKIV2L2P42285 1042 aaKnown RBP26.48■■□□□ 1.83
COL13A1-213ENST00000520267 TPI1P60174 286 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 RPAINQ86UA6 219 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 MTBPQ96DY7 904 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 CSNK1G1Q9HCP0 422 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 PLLPQ9Y342 182 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 SNX10Q9Y5X0 201 aa26.48■■□□□ 1.83
COL13A1-213ENST00000520267 NEFHP12036 1026 aa26.47■■□□□ 1.83
COL13A1-213ENST00000520267 BSPRYQ5W0U4 402 aa26.47■■□□□ 1.83
COL13A1-213ENST00000520267 NLRP9Q7RTR0 991 aa26.47■■□□□ 1.83
COL13A1-213ENST00000520267 PID1Q7Z2X4 250 aa26.47■■□□□ 1.83
COL13A1-213ENST00000520267 SLC17A6Q9P2U8 582 aa26.47■■□□□ 1.83
COL13A1-213ENST00000520267 DCTN4Q9UJW0 460 aa26.47■■□□□ 1.83
COL13A1-213ENST00000520267 C2CD2LO14523 706 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 ALDH1A2O94788 518 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 ATP6V1G2O95670 118 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 KRT16P08779 473 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 ODC1P11926 461 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 CD300LGQ6UXG3 332 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 CYS1Q717R9 158 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 HASPINQ8TF76 798 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 COLEC11Q9BWP8 271 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 FAM155AB1AL88 458 aaPredicted RBP26.46■■□□□ 1.83
COL13A1-213ENST00000520267 ADAMTS4O75173 837 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 B3GAT3O94766 335 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 ASGR1P07306 291 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 IFRD2Q12894 506 aaPredicted RBP26.46■■□□□ 1.83
COL13A1-213ENST00000520267 NPWQ8N729 165 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 ZNF398Q8TD17 642 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 APBB2Q92870 758 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 PGBD4Q96DM1 585 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 TMLHEQ9NVH6 421 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 IGSF9Q9P2J2 1179 aa26.46■■□□□ 1.83
COL13A1-213ENST00000520267 ZNF623O75123 536 aa26.45■■□□□ 1.83
COL13A1-213ENST00000520267 BDNFP23560 247 aa26.45■■□□□ 1.83
COL13A1-213ENST00000520267 ICE2Q659A1 982 aa26.45■■□□□ 1.83
COL13A1-213ENST00000520267 ZIC5Q96T25 663 aa26.45■■□□□ 1.83
COL13A1-213ENST00000520267 TXLNGQ9NUQ3 528 aa26.45■■□□□ 1.83
COL13A1-213ENST00000520267 PCMTD2Q9NV79 361 aa26.45■■□□□ 1.83
COL13A1-213ENST00000520267 MKS1Q9NXB0 559 aa26.45■■□□□ 1.83
COL13A1-213ENST00000520267 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.45■■□□□ 1.82
COL13A1-213ENST00000520267 SEPT4O43236 478 aa26.45■■□□□ 1.82
COL13A1-213ENST00000520267 PTPN3P26045 913 aa26.45■■□□□ 1.82
COL13A1-213ENST00000520267 HCAR3P49019 387 aa26.45■■□□□ 1.82
COL13A1-213ENST00000520267 FLT3LGP49771 235 aa26.45■■□□□ 1.82
COL13A1-213ENST00000520267 SERPINB9P50453 376 aa26.45■■□□□ 1.82
COL13A1-213ENST00000520267 OLIG2Q13516 323 aa26.45■■□□□ 1.82
COL13A1-213ENST00000520267 FAM171BQ6P995 826 aa26.45■■□□□ 1.82
COL13A1-213ENST00000520267 GORASP1Q9BQQ3 440 aa26.45■■□□□ 1.82
COL13A1-213ENST00000520267 MECRQ9BV79 373 aa26.45■■□□□ 1.82
COL13A1-213ENST00000520267 SYBUQ9NX95 663 aa26.45■■□□□ 1.82
COL13A1-213ENST00000520267 NUMBLQ9Y6R0 609 aa26.45■■□□□ 1.82
COL13A1-213ENST00000520267 TARSP26639 723 aaKnown RBP26.44■■□□□ 1.82
COL13A1-213ENST00000520267 NIPAL4Q0D2K0 466 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 DSC3Q14574 896 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 ARMC2Q8NEN0 867 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 TMEM209Q96SK2 561 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 ACBD6Q9BR61 282 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 WDCPQ9H6R7 721 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 KLHL8Q9P2G9 620 aaPredicted RBP26.44■■□□□ 1.82
COL13A1-213ENST00000520267 BAIAP2L1Q9UHR4 511 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 CHUKO15111 745 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 FCGRTP55899 365 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 KCNA10Q16322 511 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 ARL13BQ3SXY8 428 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 INTS6LQ5JSJ4 861 aaKnown RBP26.44■■□□□ 1.82
COL13A1-213ENST00000520267 PDZD4Q76G19 769 aaPredicted RBP26.44■■□□□ 1.82
COL13A1-213ENST00000520267 MARK2Q7KZI7 788 aaKnown RBP26.44■■□□□ 1.82
COL13A1-213ENST00000520267 NDUFAF2Q8N183 169 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 TRIM55Q9BYV6 548 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 TKTL2Q9H0I9 626 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 XPNPEP3Q9NQH7 507 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 RRN3Q9NYV6 651 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 INPP5FQ9Y2H2 1132 aa26.44■■□□□ 1.82
COL13A1-213ENST00000520267 NUP205Q92621 2012 aa26.43■■□□□ 1.82
COL13A1-213ENST00000520267 T-ENOLP0DO92 83 aa26.43■■□□□ 1.82
COL13A1-213ENST00000520267 PGAM1P18669 254 aa26.43■■□□□ 1.82
COL13A1-213ENST00000520267 NKX3-2P78367 333 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms