RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 DEPDC1BQ8WUY9 529 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 CCT6BQ92526 530 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 APBB2Q92870 758 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 STAMBPL1Q96FJ0 436 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 SIGLEC10Q96LC7 697 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 IQCGQ9H095 443 aaKnown RBP8.68□□□□□ -1.02
HMGB4-203ENST00000519684 STARD7Q9NQZ5 370 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 ZNF180Q9UJW8 692 aa8.68□□□□□ -1.02
HMGB4-203ENST00000519684 NLRC5Q86WI3 1866 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 A0A1W2PQ45 241 aaPredicted RBP8.67□□□□□ -1.02
HMGB4-203ENST00000519684 A0A1W2PQY0 241 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 SDR42E2A6NKP2 422 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 GOLGA8RI6L899 631 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 KRT38O76015 456 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 ITGB1P05556 798 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 SNRPAP09012 282 aaKnown RBP8.67□□□□□ -1.02
HMGB4-203ENST00000519684 ALADP13716 330 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 PTPRDP23468 1912 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 PSMB4P28070 264 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 EPHB2P29323 1055 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 OR1G1P47890 313 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 COG7P83436 770 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 SLC1A5Q15758 541 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 LACTB2Q53H82 288 aaPredicted RBP8.67□□□□□ -1.02
HMGB4-203ENST00000519684 LRRC8BQ6P9F7 803 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 RGS9BPQ6ZS82 235 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 FAM47EQ6ZV65 393 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 BEND5Q7L4P6 421 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 TRPM8Q7Z2W7 1104 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 PRPF39Q86UA1 669 aaKnown RBP8.67□□□□□ -1.02
HMGB4-203ENST00000519684 LRRTM3Q86VH5 581 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 CCNJLQ8IV13 435 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 ZNF567Q8N184 647 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 BANPQ8N9N5 519 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 NETO2Q8NC67 525 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 DQX1Q8TE96 717 aaKnown RBP8.67□□□□□ -1.02
HMGB4-203ENST00000519684 MTBPQ96DY7 904 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 APOPT1Q96IL0 206 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 FTHL17Q9BXU8 183 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 CEP41Q9BYV8 373 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 ABCC13Q9NSE7 274 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 OR12D3Q9UGF7 316 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 NR2E3Q9Y5X4 410 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 MYO16Q9Y6X6 1858 aa8.67□□□□□ -1.02
HMGB4-203ENST00000519684 TRIM49D1C9J1S8 452 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 TRPA1O75762 1119 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 GNRH1P01148 92 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 INHAP05111 366 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 SERPINB9P50453 376 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 SLC5A3P53794 718 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 PPIDQ08752 370 aaKnown RBP8.66□□□□□ -1.02
HMGB4-203ENST00000519684 WASHC5Q12768 1159 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 DNAJC3Q13217 504 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 SLC39A12Q504Y0 691 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 BRMS1LQ5PSV4 323 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 ITPRIPL1Q6GPH6 555 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 SCN4BQ8IWT1 228 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 ABI1Q8IZP0 508 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 MPP5Q8N3R9 675 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 TCP10LQ8TDR4 215 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 KLF6Q99612 283 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-203ENST00000519684 NAT9Q9BTE0 207 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 HMX1Q9NP08 348 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-203ENST00000519684 ANLNQ9NQW6 1124 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 KLHL14Q9P2G3 628 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 IGSF9Q9P2J2 1179 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 STARD13Q9Y3M8 1113 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-203ENST00000519684 WDR27A2RRH5 827 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 FAM159BA6NKW6 160 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 F8W810 466 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 TMEM189-UBE2V1I3L0A0 370 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 KCNK1O00180 336 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 COPEO14579 308 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 TADA2AO75478 443 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 DDHD2O94830 711 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 PYGBP11216 843 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 NEFHP12036 1026 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 PGAM1P18669 254 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 PTPN3P26045 913 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 SESN2P58004 480 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-203ENST00000519684 DSC1Q08554 894 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 GALNT2Q10471 571 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 ARHGEF6Q15052 776 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 TTC31Q49AM3 519 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-203ENST00000519684 CLLU1OSQ5K130 101 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 FYB2Q5VWT5 728 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 RWDD4Q6NW29 188 aaKnown RBP8.66□□□□□ -1.02
HMGB4-203ENST00000519684 RTN4RL1Q86UN2 441 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-203ENST00000519684 ZNF280BQ86YH2 543 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 GBP7Q8N8V2 638 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-203ENST00000519684 SCAMP5Q8TAC9 235 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 CDKL2Q92772 493 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 HDAC11Q96DB2 347 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 CFHR5Q9BXR6 569 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 OSBPL2Q9H1P3 480 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 ABI2Q9NYB9 513 aaPredicted RBP8.66□□□□□ -1.02
HMGB4-203ENST00000519684 TRHDEQ9UKU6 1024 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 PHTF1Q9UMS5 762 aa8.66□□□□□ -1.02
HMGB4-203ENST00000519684 SNX10Q9Y5X0 201 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms