RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 C2orf42Q9NWW7 574 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 STARD13Q9Y3M8 1113 aa22.76■■□□□ 1.23
VEGFA-217ENST00000518538 A0A087X0T9 212 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 ANTXRLA6NF34 631 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 FAM228BP0C875 321 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 MYBL1P10243 752 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 TIE1P35590 1138 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 ZNF75DP51815 510 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 RPL7AP62424 266 aaKnown RBP22.75■■□□□ 1.23
VEGFA-217ENST00000518538 CDO1Q16878 200 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 EMC10Q5UCC4 262 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 DCUN1D2Q6PH85 259 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 SYT13Q7L8C5 426 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 ANKS1BQ7Z6G8 1248 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 CNGA4Q8IV77 575 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 CENPIQ92674 756 aaPredicted RBP22.75■■□□□ 1.23
VEGFA-217ENST00000518538 MRFAP1L1Q96HT8 127 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 ANLNQ9NQW6 1124 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 STIM2Q9P246 746 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 HS3ST4Q9Y661 456 aa22.75■■□□□ 1.23
VEGFA-217ENST00000518538 ATMINO43313 823 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-217ENST00000518538 TDGF1P13385 188 aa22.74■■□□□ 1.23
VEGFA-217ENST00000518538 HLA-FP30511 346 aa22.74■■□□□ 1.23
VEGFA-217ENST00000518538 EIF4A3P38919 411 aaKnown RBP22.74■■□□□ 1.23
VEGFA-217ENST00000518538 ZNF143P52747 638 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-217ENST00000518538 ADKP55263 362 aaKnown RBP22.74■■□□□ 1.23
VEGFA-217ENST00000518538 AUHQ13825 339 aaKnown RBP22.74■■□□□ 1.23
VEGFA-217ENST00000518538 GEN1Q17RS7 908 aa22.74■■□□□ 1.23
VEGFA-217ENST00000518538 ACBD5Q5T8D3 534 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-217ENST00000518538 SH3PXD2AQ5TCZ1 1133 aa22.74■■□□□ 1.23
VEGFA-217ENST00000518538 TTC39BQ5VTQ0 682 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-217ENST00000518538 FBXL22Q6P050 247 aa22.74■■□□□ 1.23
VEGFA-217ENST00000518538 TSSK4Q6SA08 328 aa22.74■■□□□ 1.23
VEGFA-217ENST00000518538 FAM131BQ86XD5 332 aa22.74■■□□□ 1.23
VEGFA-217ENST00000518538 CFAP52Q8N1V2 620 aa22.74■■□□□ 1.23
VEGFA-217ENST00000518538 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.74■■□□□ 1.231e-7■■□□□ 13.1
VEGFA-217ENST00000518538 ZNF513Q8N8E2 541 aaPredicted RBP22.74■■□□□ 1.23
VEGFA-217ENST00000518538 IL17RCQ8NAC3 791 aa22.74■■□□□ 1.23
VEGFA-217ENST00000518538 ZNF653Q96CK0 615 aa22.74■■□□□ 1.23
VEGFA-217ENST00000518538 CNOT8Q9UFF9 292 aaKnown RBP22.74■■□□□ 1.23
VEGFA-217ENST00000518538 SLC8A2Q9UPR5 921 aa22.74■■□□□ 1.23
VEGFA-217ENST00000518538 SSU72P8A0A1W2PR75 194 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 AKR1B15C9JRZ8 316 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-217ENST00000518538 I6L893 689 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-217ENST00000518538 K7ESF4 209 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 KLF8O95600 359 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-217ENST00000518538 MAPK8IP2Q13387 824 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-217ENST00000518538 EIF4HQ15056 248 aaKnown RBP22.73■■□□□ 1.23
VEGFA-217ENST00000518538 RABGAP1LQ5R372 815 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 ALKBH5Q6P6C2 394 aaKnown RBP22.73■■□□□ 1.23
VEGFA-217ENST00000518538 TRMT11Q7Z4G4 463 aaKnown RBP22.73■■□□□ 1.23
VEGFA-217ENST00000518538 MFN1Q8IWA4 741 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 CCDC33Q8N5R6 958 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 ALLCQ8N6M5 410 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 FIBINQ8TAL6 211 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 WFDC5Q8TCV5 224 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 FAM172AQ8WUF8 416 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 ATOH1Q92858 354 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-217ENST00000518538 C1orf74Q96LT6 269 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 HAPLN3Q96S86 360 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 FAM126AQ9BYI3 521 aaPredicted RBP22.73■■□□□ 1.23
VEGFA-217ENST00000518538 SIK2Q9H0K1 926 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 ABCB8Q9NUT2 735 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 HCN2Q9UL51 889 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 MMP17Q9ULZ9 603 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 SCINQ9Y6U3 715 aa22.73■■□□□ 1.23
VEGFA-217ENST00000518538 CACNA1IQ9P0X4 2223 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 CCP110O43303 1012 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 LUC7L3O95232 432 aaKnown RBP22.72■■□□□ 1.23
VEGFA-217ENST00000518538 HOXA6P31267 233 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 HDAC4P56524 1084 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 NHLH1Q02575 133 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 CDH18Q13634 790 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 DMC1Q14565 340 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 RAB6CQ53S08 254 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 KIAA0907Q7Z7F0 614 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-217ENST00000518538 CCDC117Q8IWD4 279 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-217ENST00000518538 CARNMT1Q8N4J0 409 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 TXNDC5Q8NBS9 432 aaKnown RBP22.72■■□□□ 1.23
VEGFA-217ENST00000518538 WFIKKN2Q8TEU8 576 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 NELL1Q92832 810 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 RPRD1AQ96P16 312 aaPredicted RBP22.72■■□□□ 1.23
VEGFA-217ENST00000518538 CNPY3Q9BT09 278 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 RAB6CQ9H0N0 254 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 GGA2Q9UJY4 613 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 VANGL2Q9ULK5 521 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 NENFQ9UMX5 172 aa22.72■■□□□ 1.23
VEGFA-217ENST00000518538 TIMM44O43615 452 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 PABPC1P11940 636 aaKnown RBP22.71■■□□□ 1.23
VEGFA-217ENST00000518538 DESP17661 470 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 GGCXP38435 758 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 NRLP54845 237 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 ARL13BQ3SXY8 428 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 C5orf22Q49AR2 442 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 EOGTQ5NDL2 527 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 CCDC122Q5T0U0 273 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 EGFLAMQ63HQ2 1017 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 AHI1Q8N157 1196 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 UCMAQ8WVF2 138 aa22.71■■□□□ 1.23
VEGFA-217ENST00000518538 IGSF8Q969P0 613 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms