RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 LAMC2Q13753 1193 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 KCTD2Q14681 263 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 CCDC153Q494R4 210 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 MDH1BQ5I0G3 518 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 SPANXN3Q5MJ09 141 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 FAM182AQ5T1J6 154 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 C1orf146Q5VVC0 180 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 FOXB2Q5VYV0 432 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 MTHFD1LQ6UB35 978 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 IZUMO2Q6UXV1 221 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 ATG14Q6ZNE5 492 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 GADL1Q6ZQY3 521 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 GALNT15Q8N3T1 639 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 LRRN4Q8WUT4 740 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 NT5C3BQ969T7 300 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 CLPTM1LQ96KA5 538 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 HSFY1Q96LI6 401 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 CPNE1Q99829 537 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 MROH8Q9H579 483 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 FAM49BQ9NUQ9 324 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 RBPJLQ9UBG7 517 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 PPM1HQ9ULR3 514 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 KCNH4Q9UQ05 1017 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 APOBEC2Q9Y235 224 aaKnown RBP6.85□□□□□ -1.31
CDH12-203ENST00000517378 RBM47A0AV96 593 aaKnown RBP6.85□□□□□ -1.31
CDH12-203ENST00000517378 ASB14A6NK59 587 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 EIF4E1BA6NMX2 242 aaKnown RBP6.85□□□□□ -1.31
CDH12-203ENST00000517378 RNF103O00237 685 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 CXCL11O14625 94 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 MFSD11O43934 449 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 LYPLA1O75608 230 aaPredicted RBP6.85□□□□□ -1.31
CDH12-203ENST00000517378 STK10O94804 968 aaKnown RBP6.85□□□□□ -1.31
CDH12-203ENST00000517378 VTNP04004 478 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 C6orf222P0C671 652 aaPredicted RBP6.85□□□□□ -1.31
CDH12-203ENST00000517378 CALRP27797 417 aaKnown RBP6.85□□□□□ -1.31
CDH12-203ENST00000517378 ARRB2P32121 409 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 GP5P40197 560 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 PEX19P40855 299 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 MATKP42679 507 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 CSRP3P50461 194 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 ATXN1P54253 815 aaKnown RBP6.85□□□□□ -1.31
CDH12-203ENST00000517378 PDE1BQ01064 536 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 SATB1Q01826 763 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 PRKG1Q13976 671 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 PAFAH1B3Q15102 231 aaKnown RBP6.85□□□□□ -1.31
CDH12-203ENST00000517378 SLC25A52Q3SY17 297 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 OTUD1Q5VV17 481 aaPredicted RBP6.85□□□□□ -1.31
CDH12-203ENST00000517378 MAMDC4Q6UXC1 1216 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 ALKAL1Q6UXT8 129 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 ACAD11Q709F0 780 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 DHDDSQ86SQ9 333 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 MFN1Q8IWA4 741 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 UNC5BQ8IZJ1 945 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 CCDC33Q8N5R6 958 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 C7orf31Q8N865 590 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 COLGALT1Q8NBJ5 622 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 PHC3Q8NDX5 983 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 SHCBP1Q8NEM2 672 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 PPP1R14CQ8TAE6 165 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 PPP4R1Q8TF05 950 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 CLEC4CQ8WTT0 213 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 KBTBD7Q8WVZ9 684 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 AZIN2Q96A70 460 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 CLMNQ96JQ2 1002 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 ZMAT2Q96NC0 199 aaKnown RBP6.85□□□□□ -1.31
CDH12-203ENST00000517378 MCMBPQ9BTE3 642 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.85□□□□□ -1.31
CDH12-203ENST00000517378 IL1RAPL1Q9NZN1 696 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 AKT3Q9Y243 479 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 PCDHB12Q9Y5F1 795 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 SNX9Q9Y5X1 595 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 CSADQ9Y600 493 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 PSAT1Q9Y617 370 aa6.85□□□□□ -1.31
CDH12-203ENST00000517378 TMEM114B3SHH9 223 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 PPEF2O14830 753 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 CASQ2O14958 399 aaPredicted RBP6.84□□□□□ -1.31
CDH12-203ENST00000517378 H2AFYO75367 372 aaKnown RBP6.84□□□□□ -1.31
CDH12-203ENST00000517378 DAB1O75553 588 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 LYNP07948 512 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 HOXD8P13378 290 aaPredicted RBP6.84□□□□□ -1.31
CDH12-203ENST00000517378 GOT1P17174 413 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 MX2P20592 715 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 ACAT1P24752 427 aaKnown RBP6.84□□□□□ -1.31
CDH12-203ENST00000517378 MGAT1P26572 445 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 ARL4AP40617 200 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 ABCE1P61221 599 aaKnown RBP6.84□□□□□ -1.31
CDH12-203ENST00000517378 ROR2Q01974 943 aaKnown RBP6.84□□□□□ -1.31
CDH12-203ENST00000517378 CCNIQ14094 377 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 DPYSQ14117 519 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 GRTP1Q5TC63 336 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 DPY19L2Q6NUT2 758 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 C16orf46Q6P387 395 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 SLC30A9Q6PML9 568 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 CLEC14AQ86T13 490 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 PDSS2Q86YH6 399 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 C10orf107Q8IVU9 208 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 GPC2Q8N158 579 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 PPP2R3CQ969Q6 453 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 CMTM5Q96DZ9 223 aa6.84□□□□□ -1.31
CDH12-203ENST00000517378 CERS2Q96G23 380 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms