RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 CHRNB4P30926 498 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 RANGAP1P46060 587 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 PGFP49763 221 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 FUT6P51993 359 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 NLRP5P59047 1200 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 SUMO2P61956 95 aaKnown RBP-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 PSMC1P62191 440 aaKnown RBP-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 SETMARQ53H47 684 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 C2orf83Q53S99 150 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 TRIM61Q5EBN2 209 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZSCAN25Q6NSZ9 544 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 PAQR6Q6TCH4 344 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 IGFL2Q6UWQ7 119 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 CEACAM20Q6UY09 585 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 KYAT3Q6YP21 454 aaKnown RBP-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 CELF2-AS1Q8N7Q2 184 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 PNPLA1Q8N8W4 532 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 KLHL30-AS1Q8NEE0 82 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 TMEM171Q8WVE6 324 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 AKAP1Q92667 903 aaKnown RBP eCLIP-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 ZNF845Q96IR2 970 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 SPATA9Q9BWV2 254 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 GREM2Q9H772 168 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 BARHL2Q9NY43 387 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 TAAR2Q9P1P5 351 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 NDRG4Q9ULP0 352 aaKnown RBP-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 LAMP3Q9UQV4 416 aa-0.47□□□□□ -2.48
RNU6-542P-201ENST00000516405 TNFSF12-TNFSF13A0A0A6YY99 330 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 LILRA5A6NI73 299 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 HNRNPCL2B2RXH8 293 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 EPM2AB3EWF7 344 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 BLOC1S5-TXNDC5H3BN57 136 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 hCG_1984214I3L0E3 225 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 EYA2O00167 538 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 VWA5AO00534 786 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 CPEP16870 476 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 CD53P19397 219 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 ITIH1P19827 911 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 SOX2P48431 317 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZNF135P52742 658 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 LILRA4P59901 499 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 FANCCQ00597 558 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZBTB17Q13105 803 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 E2F2Q14209 437 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 TNNI3KQ59H18 835 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 FAM53AQ6NSI3 398 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 FAM180AQ6UWF9 173 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 Q6ZS52 159 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 MON1BQ7L1V2 547 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 PDSS2Q86YH6 399 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 APLFQ8IW19 511 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 IZUMO1Q8IYV9 350 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 AHI1Q8N157 1196 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 C12orf76Q8N812 135 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 GRHL3Q8TE85 626 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 RAB24Q969Q5 203 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 EAF2Q96CJ1 260 aaPredicted RBP-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 OMA1Q96E52 524 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 B3GALT6Q96L58 329 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 APOLD1Q96LR9 279 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 PIGQQ9BRB3 760 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 TRIM51Q9BSJ1 452 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 DHRS4Q9BTZ2 278 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 SLC25A18Q9H1K4 315 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 GPR35Q9HC97 309 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 FGF22Q9HCT0 170 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 TMEM160Q9NX00 188 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 TMEM181Q9P2C4 612 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 USP35Q9P2H5 1018 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 MGAT4CQ9UBM8 478 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZDHHC2Q9UIJ5 367 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 ASAP1Q9ULH1 1129 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 FZD4Q9ULV1 537 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 MRPS17Q9Y2R5 130 aaKnown RBP-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 MRPS23Q9Y3D9 190 aaKnown RBP-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 SNX14Q9Y5W7 946 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 PTCH1Q13635 1447 aa-0.48□□□□□ -2.49
RNU6-542P-201ENST00000516405 TAF1P21675 1872 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 A0A0G2JLM5 398 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 SH2B2O14492 632 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZSCAN9O15535 394 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 PCDH7O60245 1069 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 CCNT1O60563 726 aaKnown RBP-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 SOX30O94993 753 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 NTSR2O95665 410 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 ENO3P13929 434 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 ZNF17P17021 662 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 KLK2P20151 261 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 ETFBP38117 255 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 ITGAEP38570 1179 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 PDE6CP51160 858 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 NUDT6P53370 316 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 GPC5P78333 572 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 DUSP6Q16828 381 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 PRR30Q53SZ7 412 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 HERC4Q5GLZ8 1057 aaPredicted RBP-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 EEF1AKMT2Q5JPI9 291 aaKnown RBP-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 ISM2Q6H9L7 571 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 GPRIN3Q6ZVF9 776 aa-0.49□□□□□ -2.49
RNU6-542P-201ENST00000516405 SPATC1Q76KD6 591 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms