RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 ATF7P17544 494 aaPredicted RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 CHMP24386 653 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 SLC8A1P32418 973 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 GALNSP34059 522 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 PGM1P36871 562 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 RARRES1P49788 294 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 CCT8P50990 548 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 ZNF84P51523 738 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 RPS6KA3P51812 740 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 MVDP53602 400 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 CLNS1AP54105 237 aaKnown RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 NAP1L1P55209 391 aaKnown RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 CASP6P55212 293 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 RNASE12Q5GAN4 147 aaKnown RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 VWA5B1Q5TIE3 1220 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 SPATA1Q5VX52 437 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 ANKRD40Q6AI12 368 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 BCDIN3DQ7Z5W3 292 aaKnown RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 PEG10Q86TG7 708 aaKnown RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 TBC1D1Q86TI0 1168 aaPredicted RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 KRTAP19-1Q8IUB9 90 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 NME8Q8N427 588 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 TCP11L2Q8N4U5 519 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 AMER2Q8N7J2 671 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 ZNF366Q8N895 744 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 ADAMTS18Q8TE60 1221 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 NOC3LQ8WTT2 800 aaKnown RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 TBC1D22AQ8WUA7 517 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 TFAP2BQ92481 460 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 AKAP1Q92667 903 aaKnown RBP eCLIP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 FYTTD1Q96QD9 318 aaKnown RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 CD180Q99467 661 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 ALG13Q9NP73 1137 aaKnown RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 SLC2A4RGQ9NR83 387 aa3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 BEX4Q9NWD9 120 aaPredicted RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 CCNL1Q9UK58 526 aaPredicted RBP3.66□□□□□ -1.82
RNU6-390P-201ENST00000516259 TMEM191CA6NGB0 347 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 FAM90A7PA6NKC0 464 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 FAM90A22PA8MWA6 464 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 FAM90A12PA8MX19 464 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 FAM90A23PA8MXZ1 464 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 ZNF213O14771 459 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 KLK10O43240 276 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 ANP32CO43423 234 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 CA12O43570 354 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 PRAMEF2O60811 474 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 F9P00740 461 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 HNRNPA1P09651 372 aaKnown RBP eCLIP3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 DRD4P21917 467 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 CCT4P50991 539 aaKnown RBP3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 OAZ1P54368 228 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 ADPRHP54922 357 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 WDR5P61964 334 aaKnown RBP3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 RAE1P78406 368 aaKnown RBP3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 HOXA4Q00056 320 aaPredicted RBP3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 CDK18Q07002 472 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 GOLGA8FQ08AF8 430 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 PTP4A2Q12974 167 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 PRKG2Q13237 762 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 SEMA3AQ14563 771 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 LARS2Q15031 903 aaKnown RBP3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 GPR68Q15743 365 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 CNGA3Q16281 694 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 PCID2Q5JVF3 399 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 AADACL2Q6P093 401 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 FAM180BQ6P0A1 224 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 CEP85Q6P2H3 762 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 KIRREL2Q6UWL6 708 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 VSTM1Q6UX27 236 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 KYAT3Q6YP21 454 aaKnown RBP3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 DPY19L3Q6ZPD9 716 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 GALNT7Q86SF2 657 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 HEATR4Q86WZ0 1026 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 EXD3Q8N9H8 876 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 TERB1Q8NA31 727 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 NFKBIDQ8NI38 313 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 ACTRT2Q8TDY3 377 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 RNF125Q96EQ8 232 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 RRP36Q96EU6 259 aaKnown RBP3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 PRR11Q96HE9 360 aaPredicted RBP3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 ELOVL1Q9BW60 279 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 PHF7Q9BWX1 381 aaPredicted RBP3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 OLA1Q9NTK5 396 aaKnown RBP3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 MTMR4Q9NYA4 1195 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 TBC1D14Q9P2M4 693 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 RAB21Q9UL25 225 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 OSGIN2Q9Y236 505 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 RCE1Q9Y256 329 aa3.65□□□□□ -1.83
RNU6-390P-201ENST00000516259 TMEM247A6NEH6 219 aa3.64□□□□□ -1.83
RNU6-390P-201ENST00000516259 SH2D7A6NKC9 451 aaPredicted RBP3.64□□□□□ -1.83
RNU6-390P-201ENST00000516259 LINC00473A8K010 186 aa3.64□□□□□ -1.83
RNU6-390P-201ENST00000516259 K7ENM7 598 aa3.64□□□□□ -1.83
RNU6-390P-201ENST00000516259 GRM8O00222 908 aa3.64□□□□□ -1.83
RNU6-390P-201ENST00000516259 NARSO43776 548 aaKnown RBP3.64□□□□□ -1.83
RNU6-390P-201ENST00000516259 CCNT1O60563 726 aaKnown RBP3.64□□□□□ -1.83
RNU6-390P-201ENST00000516259 USP12O75317 370 aa3.64□□□□□ -1.83
RNU6-390P-201ENST00000516259 JTBO76095 146 aa3.64□□□□□ -1.83
RNU6-390P-201ENST00000516259 HLA-DQA2P01906 255 aa3.64□□□□□ -1.83
RNU6-390P-201ENST00000516259 ENO1P06733 434 aaKnown RBP3.64□□□□□ -1.83
RNU6-390P-201ENST00000516259 SLC3A2P08195 630 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms