RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 TPMTP51580 245 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 APBA1Q02410 837 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 DPCR1Q3MIW9 517 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 DCAF6Q58WW2 860 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 ZC3H12AQ5D1E8 599 aaKnown RBP14.17□□□□□ -0.14
TCOF1-215ENST00000515516 MS4A13Q5J8X5 152 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 CT47A1Q5JQC4 288 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-215ENST00000515516 SH3PXD2AQ5TCZ1 1133 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 SYPL2Q5VXT5 272 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 NADSYN1Q6IA69 706 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 KIAA0907Q7Z7F0 614 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-215ENST00000515516 ADIPOR2Q86V24 386 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 CHSY1Q86X52 802 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 CACUL1Q86Y37 369 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 PASD1Q8IV76 773 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 SLC41A1Q8IVJ1 513 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 ATP6V0D2Q8N8Y2 350 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 CADM4Q8NFZ8 388 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 SLC39A13Q96H72 371 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 BTN2A3PQ96KV6 586 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 GPR174Q9BXC1 333 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 LHX5Q9H2C1 402 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 SLC32A1Q9H598 525 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 FAM204AQ9H8W3 233 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 CD93Q9NPY3 652 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.17□□□□□ -0.14
TCOF1-215ENST00000515516 WSB2Q9NYS7 404 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-215ENST00000515516 CYTH4Q9UIA0 394 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 PCDHGC3Q9UN70 934 aa14.17□□□□□ -0.14
TCOF1-215ENST00000515516 OPHN1O60890 802 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 HSF2BPO75031 334 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 DNTTP04053 509 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 ASLP04424 464 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 TPM2P07951 284 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 CSRP1P21291 193 aaKnown RBP14.16□□□□□ -0.14
TCOF1-215ENST00000515516 ABCB4P21439 1286 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 COPAP53621 1224 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 RPS24P62847 133 aaKnown RBP14.16□□□□□ -0.14
TCOF1-215ENST00000515516 MTA1Q13330 715 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 CAMK2GQ13555 558 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-215ENST00000515516 PLEKHG6Q3KR16 790 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 HSP90AA4PQ58FG1 418 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 OR6B2Q6IFH4 312 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 C11orf57Q6ZUT1 292 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-215ENST00000515516 LGI2Q8N0V4 545 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 CNTNAP3BQ96NU0 1288 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 CNTNAP3Q9BZ76 1288 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 NUCKS1Q9H1E3 243 aaKnown RBP14.16□□□□□ -0.14
TCOF1-215ENST00000515516 MIR1-1HGQ9H1L0 117 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 TMEM245Q9H330 911 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 ASNSD1Q9NWL6 643 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 KIAA1522Q9P206 1035 aaPredicted RBP14.16□□□□□ -0.14
TCOF1-215ENST00000515516 ANGPTL2Q9UKU9 493 aa14.16□□□□□ -0.14
TCOF1-215ENST00000515516 SYNJ2BP-COX16A0A087WUM0 186 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 KCNJ18B7U540 433 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 F5H5T6 163 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 FOXN3O00409 490 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-215ENST00000515516 ARHGAP33O14559 1287 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 RNASEH1O60930 286 aaKnown RBP14.15□□□□□ -0.14
TCOF1-215ENST00000515516 CEACAM1P13688 526 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 TACR2P21452 398 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 CCR1P32246 355 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 ZBTB16Q05516 673 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 SFSWAPQ12872 951 aaKnown RBP14.15□□□□□ -0.14
TCOF1-215ENST00000515516 RAPGEF1Q13905 1077 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 KCNJ12Q14500 433 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 PTPRNQ16849 979 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 RNF219Q5W0B1 726 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-215ENST00000515516 RAP1GAP2Q684P5 730 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 FAM124AQ86V42 546 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 DEFB106AQ8N104 65 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 CFAP52Q8N1V2 620 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 WDTC1Q8N5D0 677 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 ZNF366Q8N895 744 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 C1orf131Q8NDD1 294 aaKnown RBP14.15□□□□□ -0.14
TCOF1-215ENST00000515516 WFDC5Q8TCV5 224 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 TTC17Q96AE7 1141 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 PRICKLE1Q96MT3 831 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-215ENST00000515516 CPXM1Q96SM3 734 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 CAPN10Q9HC96 672 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 SIX2Q9NPC8 291 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 FSCN3Q9NQT6 498 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 DDIT4Q9NX09 232 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 COX16Q9P0S2 106 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 NCKAP1Q9Y2A7 1128 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 NFE2L3Q9Y4A8 694 aa14.15□□□□□ -0.14
TCOF1-215ENST00000515516 A0A1B0GTW7 788 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 METTL12A8MUP2 240 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 KCNU1A8MYU2 1149 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 GRAP2O75791 330 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 LUC7L3O95232 432 aaKnown RBP14.14□□□□□ -0.15
TCOF1-215ENST00000515516 IGLV3-19P01714 112 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 EEF1GP26641 437 aaKnown RBP14.14□□□□□ -0.15
TCOF1-215ENST00000515516 MAOBP27338 520 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 CSKP41240 450 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 TAF5Q15542 800 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 TTC31Q49AM3 519 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-215ENST00000515516 RABGAP1LQ5R372 815 aa14.14□□□□□ -0.15
TCOF1-215ENST00000515516 TTC39BQ5VTQ0 682 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-215ENST00000515516 DCAF12L1Q5VU92 463 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms