RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ELF2Q15723 593 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 MAP7D1Q3KQU3 841 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 FUT11Q495W5 492 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 FNDC3BQ53EP0 1204 aaKnown RBP11.91□□□□□ -0.5
VCAN-212ENST00000515397 RAB6CQ53S08 254 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 FAM102AQ5T9C2 384 aaPredicted RBP11.91□□□□□ -0.5
VCAN-212ENST00000515397 OTUD1Q5VV17 481 aaPredicted RBP11.91□□□□□ -0.5
VCAN-212ENST00000515397 MBLAC2Q68D91 279 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 TRNP1Q6NT89 227 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 BEND5Q7L4P6 421 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 C14orf80Q86SX3 495 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 XYLT1Q86Y38 959 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 MFN1Q8IWA4 741 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 AZIN2Q96A70 460 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 ZC3H10Q96K80 434 aaKnown RBP11.91□□□□□ -0.5
VCAN-212ENST00000515397 GABRG3Q99928 467 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 SLC2A11Q9BYW1 496 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 NAT10Q9H0A0 1025 aaKnown RBP11.91□□□□□ -0.5
VCAN-212ENST00000515397 SIK2Q9H0K1 926 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 RAB6CQ9H0N0 254 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 ANLNQ9NQW6 1124 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 PIGVQ9NUD9 493 aa11.91□□□□□ -0.5
VCAN-212ENST00000515397 INTS6Q9UL03 887 aaKnown RBP11.91□□□□□ -0.5
VCAN-212ENST00000515397 KIAA1549LQ6ZVL6 1849 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.9□□□□□ -0.5
VCAN-212ENST00000515397 SMTNL1A8MU46 457 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 PATE3B3GLJ2 98 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 DAB1O75553 588 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 RHOBTB1O94844 696 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 EPN2O95208 641 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 ADCY5O95622 1261 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 EPHX1P07099 455 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 GLI1P08151 1106 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 ABCB4P21439 1286 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 CDH5P33151 784 aaPredicted RBP11.9□□□□□ -0.5
VCAN-212ENST00000515397 NOS2P35228 1153 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 FLT3P36888 993 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 PTGER3P43115 390 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 CTSOP43234 321 aaPredicted RBP11.9□□□□□ -0.5
VCAN-212ENST00000515397 GABRB2P47870 512 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 SULT1E1P49888 294 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 DNAH14Q0VDD8 3507 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 IQCB1Q15051 598 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 SLC26A9Q7LBE3 791 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 DNAAF5Q86Y56 855 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 APCDD1Q8J025 514 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 EMC1Q8N766 993 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 ATP6V0D2Q8N8Y2 350 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 HJURPQ8NCD3 748 aaPredicted RBP11.9□□□□□ -0.5
VCAN-212ENST00000515397 UCMAQ8WVF2 138 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 PIGKQ92643 395 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 IGSF8Q969P0 613 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 LMLNQ96KR4 655 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 BTN2A3PQ96KV6 586 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 MRGPRX1Q96LB2 322 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 TBCBQ99426 244 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 C11orf70Q9BRQ4 267 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 FUCA2Q9BTY2 467 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 MKRN2Q9H000 416 aaKnown RBP11.9□□□□□ -0.5
VCAN-212ENST00000515397 SEPT11Q9NVA2 429 aaKnown RBP11.9□□□□□ -0.5
VCAN-212ENST00000515397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.9□□□□□ -0.5
VCAN-212ENST00000515397 ASNSD1Q9NWL6 643 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.9□□□□□ -0.5
VCAN-212ENST00000515397 SLC12A6Q9UHW9 1150 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 PLA2G4CQ9UP65 541 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 HS3ST4Q9Y661 456 aa11.9□□□□□ -0.5
VCAN-212ENST00000515397 DCDC2BA2VCK2 349 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 H0Y626 953 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 I6L893 689 aaPredicted RBP11.89□□□□□ -0.51
VCAN-212ENST00000515397 ZBTB24O43167 697 aaPredicted RBP11.89□□□□□ -0.51
VCAN-212ENST00000515397 SYNCRIPO60506 623 aaKnown RBP11.89□□□□□ -0.51
VCAN-212ENST00000515397 CYP1A1P04798 512 aaPredicted RBP11.89□□□□□ -0.51
VCAN-212ENST00000515397 POLR2EP19388 210 aaKnown RBP11.89□□□□□ -0.51
VCAN-212ENST00000515397 CCR1P32246 355 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 MPLP40238 635 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 CSKP41240 450 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 MATKP42679 507 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 SNX16P57768 344 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 CDR2Q01850 454 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 CENPCQ03188 943 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 NNTQ13423 1086 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 CSRP2Q16527 193 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 PTPRNQ16849 979 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 SH3PXD2AQ5TCZ1 1133 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 PMS2CLQ68D20 193 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 FBXL22Q6P050 247 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 SERPINA13PQ6UXR4 307 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 PRR23CQ6ZRP0 262 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 LUZP1Q86V48 1076 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 TMPRSS6Q8IU80 811 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 ZNF397Q8NF99 534 aaPredicted RBP11.89□□□□□ -0.51
VCAN-212ENST00000515397 FIBINQ8TAL6 211 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 CFAP57Q96MR6 1250 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 ERGIC2Q96RQ1 377 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 PRMT1Q99873 361 aaKnown RBP11.89□□□□□ -0.51
VCAN-212ENST00000515397 DDX50Q9BQ39 737 aaKnown RBP11.89□□□□□ -0.51
VCAN-212ENST00000515397 TRIM62Q9BVG3 475 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 MAGEB5Q9BZ81 275 aa11.89□□□□□ -0.51
VCAN-212ENST00000515397 PRDM16Q9HAZ2 1276 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms