RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 ELOVL6Q9H5J4 265 aa13.59□□□□□ -0.23
TCOF1-214ENST00000515035 WDR41Q9HAD4 459 aa13.59□□□□□ -0.23
TCOF1-214ENST00000515035 PIDD1Q9HB75 910 aa13.59□□□□□ -0.23
TCOF1-214ENST00000515035 ENTPD7Q9NQZ7 604 aa13.59□□□□□ -0.23
TCOF1-214ENST00000515035 ZNF624Q9P2J8 865 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-214ENST00000515035 PPP2R3BQ9Y5P8 575 aa13.59□□□□□ -0.23
TCOF1-214ENST00000515035 LOC100506127A0A0U1RQW1 187 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 SLC2A4P14672 509 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 MYBPC2Q14324 1141 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 TSNQ15631 228 aaKnown RBP13.58□□□□□ -0.23
TCOF1-214ENST00000515035 PKN1Q16512 942 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 TIMM50Q3ZCQ8 353 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 CASP12Q6UXS9 341 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 TTC7BQ86TV6 843 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 CYP4Z2PQ8N1L4 340 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 C10orf53Q8N6V4 93 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 CENPIQ92674 756 aaPredicted RBP13.58□□□□□ -0.23
TCOF1-214ENST00000515035 NDNQ99608 321 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 SLC7A5P2Q9GIP4 190 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 ABCB10Q9NRK6 738 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 EURLQ9NYK6 297 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 VAV3Q9UKW4 847 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 AK5Q9Y6K8 562 aa13.58□□□□□ -0.23
TCOF1-214ENST00000515035 ITSN1Q15811 1721 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 GNG14A0A1W2PPG7 69 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 PDE2AO00408 941 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-214ENST00000515035 PLA2G6O60733 806 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 SEC24AO95486 1093 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 RRP1BQ14684 758 aaKnown RBP13.58□□□□□ -0.24
TCOF1-214ENST00000515035 IKBIPQ70UQ0 350 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 FAM131BQ86XD5 332 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 ITFG1Q8TB96 612 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 ZDHHC15Q96MV8 337 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 FICDQ9BVA6 458 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 MTMR12Q9C0I1 747 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 POLR1BQ9H9Y6 1135 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 PRR23AA6NEV1 266 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 ALDH1A1P00352 501 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 ANPEPP15144 967 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 KIAA0408Q6ZU52 694 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 ZNF467Q7Z7K2 595 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-214ENST00000515035 HOMEZQ8IX15 550 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 GIPC3Q8TF64 312 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 SPIRE2Q8WWL2 714 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 ACOX2Q99424 681 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 ATXN10Q9UBB4 475 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 POLLQ9UGP5 575 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 SORCS3Q9UPU3 1222 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 PCDHA3Q9Y5H8 950 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 LSM8O95777 96 aaKnown RBP13.58□□□□□ -0.24
TCOF1-214ENST00000515035 DRD4P21917 467 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 CDH3P22223 829 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 EPHX2P34913 555 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 CD151P48509 253 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 GRTP1Q5TC63 336 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 PCDH20Q8N6Y1 951 aaKnown RBP13.58□□□□□ -0.24
TCOF1-214ENST00000515035 MAGEE2Q8TD90 523 aaPredicted RBP13.58□□□□□ -0.24
TCOF1-214ENST00000515035 ACTR8Q9H981 624 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 GPRC5CQ9NQ84 441 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 KCND1Q9NSA2 647 aa13.58□□□□□ -0.24
TCOF1-214ENST00000515035 NPM3O75607 178 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ACO1P21399 889 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 CDK7P50613 346 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 AUHQ13825 339 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 DNAJC14Q6Y2X3 702 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ATG14Q6ZNE5 492 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 AMER2Q8N7J2 671 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 FNDC5Q8NAU1 212 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 WDR48Q8TAF3 677 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 RXFP2Q8WXD0 754 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 POP1Q99575 1024 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 SLC38A7Q9NVC3 462 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 KIAA1257Q9ULG3 409 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 C15orf38-AP3S2A0A0A6YYH1 394 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 CCDC154A6NI56 674 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 MYL12BO14950 172 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 OGTO15294 1046 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 MSH3P20585 1137 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 MEA1Q16626 185 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 MFSD4BQ5TF39 518 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ARPINQ7Z6K5 226 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 MCOLN2Q8IZK6 566 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 MSL3Q8N5Y2 521 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ETNPPLQ8TBG4 499 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ATG4CQ96DT6 458 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 RSL24D1Q9UHA3 163 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ATP6V1HQ9UI12 483 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 TMEM114B3SHH9 223 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 TADA2AO75478 443 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 TAF6P49848 677 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 KYAT3Q6YP21 454 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 MRPL48Q96GC5 212 aaKnown RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 RPRD1AQ96P16 312 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 SEPT5Q99719 369 aaPredicted RBP13.57□□□□□ -0.24
TCOF1-214ENST00000515035 KLHL1Q9NR64 748 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 UBP1Q9NZI7 540 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 ENOPH1Q9UHY7 261 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 FAM237BA0A1B0GVD1 139 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 GLP2RO95838 553 aa13.57□□□□□ -0.24
TCOF1-214ENST00000515035 SHBGP04278 402 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms