RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 RHOBTB2Q9BYZ6 727 aa4.31□□□□□ -1.72
NEDD4-211ENST00000514893 MAP6D1Q9H9H5 199 aa4.31□□□□□ -1.72
NEDD4-211ENST00000514893 ZNF180Q9UJW8 692 aa4.31□□□□□ -1.72
NEDD4-211ENST00000514893 FZD10Q9ULW2 581 aa4.31□□□□□ -1.72
NEDD4-211ENST00000514893 COL4A3BPQ9Y5P4 624 aa4.31□□□□□ -1.72
NEDD4-211ENST00000514893 BECN2A8MW95 431 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 KRT36O76013 467 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 PPP1R3DO95685 299 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 UMODP07911 640 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 DRD1P21728 446 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 SEC61A1P61619 476 aaKnown RBP4.3□□□□□ -1.72
NEDD4-211ENST00000514893 GPS2Q13227 327 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 KRTAP24-1Q3LI83 254 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 ZNF718Q3SXZ3 478 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 ZNF672Q499Z4 452 aaPredicted RBP4.3□□□□□ -1.72
NEDD4-211ENST00000514893 FAM76BQ5HYJ3 339 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 DNTTIP2Q5QJE6 756 aaKnown RBP4.3□□□□□ -1.72
NEDD4-211ENST00000514893 FAM90A2PQ658T7 463 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 ACSM6Q6P461 480 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 TLDC1Q6P9B6 456 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 CYB5R4Q7L1T6 521 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 ZCRB1Q8TBF4 217 aaKnown RBP4.3□□□□□ -1.72
NEDD4-211ENST00000514893 LRRC27Q9C0I9 530 aa4.3□□□□□ -1.72
NEDD4-211ENST00000514893 RGS14O43566 566 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 CCNT2O60583 730 aaKnown RBP4.29□□□□□ -1.72
NEDD4-211ENST00000514893 NFATC1O95644 943 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 MYBP10242 640 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 FCGR1AP12314 374 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 CACNB3P54284 484 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 KIF5AQ12840 1032 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 GPR18Q14330 331 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 KRT71Q3SY84 523 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 FNBP1LQ5T0N5 605 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 ARMC9Q7Z3E5 817 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 TPH2Q8IWU9 490 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 GABPB2Q8TAK5 448 aaPredicted RBP4.29□□□□□ -1.72
NEDD4-211ENST00000514893 GLMPQ8WWB7 406 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 RTP4Q96DX8 246 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 C1QTNF4Q9BXJ3 329 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 RETREG1Q9H6L5 497 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 ZBTB26Q9HCK0 441 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 TBC1D23Q9NUY8 699 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 TMOD4Q9NZQ9 345 aa4.29□□□□□ -1.72
NEDD4-211ENST00000514893 TRIP12Q14669 1992 aaPredicted RBP4.29□□□□□ -1.72
NEDD4-211ENST00000514893 FOXO6A8MYZ6 492 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 SLC16A5O15375 505 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 MT-ND5P03915 603 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 RFPL3SP0C7P2 107 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 ABATP80404 500 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 KIAA1755Q5JYT7 1200 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 C9orf57Q5W0N0 161 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 WBP2NLQ6ICG8 309 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 CREB3L2Q70SY1 520 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 H1FNTQ75WM6 255 aaPredicted RBP4.28□□□□□ -1.72
NEDD4-211ENST00000514893 RNF44Q7L0R7 432 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 EPM2AIP1Q7L775 607 aaPredicted RBP4.28□□□□□ -1.72
NEDD4-211ENST00000514893 GPSM1Q86YR5 675 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 CADM3Q8N126 398 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 OR52N4Q8NGI2 321 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 APIPQ96GX9 242 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 WDR24Q96S15 920 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 ABHD14AQ9BUJ0 271 aa4.28□□□□□ -1.72
NEDD4-211ENST00000514893 EVPLQ92817 2033 aa4.28□□□□□ -1.73
NEDD4-211ENST00000514893 CBFA2T3O75081 653 aa4.27□□□□□ -1.73
NEDD4-211ENST00000514893 COQ9O75208 318 aa4.27□□□□□ -1.73
NEDD4-211ENST00000514893 ZBTB11O95625 1053 aaPredicted RBP4.27□□□□□ -1.73
NEDD4-211ENST00000514893 CXCR3P49682 368 aa4.27□□□□□ -1.73
NEDD4-211ENST00000514893 PDLIM4P50479 330 aa4.27□□□□□ -1.73
NEDD4-211ENST00000514893 EEF1A2Q05639 463 aaKnown RBP4.27□□□□□ -1.73
NEDD4-211ENST00000514893 PIN1Q13526 163 aaPredicted RBP4.27□□□□□ -1.73
NEDD4-211ENST00000514893 KIF19Q2TAC6 998 aa4.27□□□□□ -1.73
NEDD4-211ENST00000514893 TMEM196Q5HYL7 178 aa4.27□□□□□ -1.73
NEDD4-211ENST00000514893 HIST2H2BCQ6DN03 193 aa4.27□□□□□ -1.73
NEDD4-211ENST00000514893 CLASRPQ8N2M8 674 aaKnown RBP4.27□□□□□ -1.73
NEDD4-211ENST00000514893 MSLNLQ96KJ4 702 aa4.27□□□□□ -1.73
NEDD4-211ENST00000514893 GPR78Q96P69 363 aa4.27□□□□□ -1.73
NEDD4-211ENST00000514893 EIF3CQ99613 913 aaKnown RBP4.27□□□□□ -1.73
NEDD4-211ENST00000514893 PRDM16Q9HAZ2 1276 aa4.27□□□□□ -1.73
NEDD4-211ENST00000514893 PLEKHB1Q9UF11 243 aaPredicted RBP4.27□□□□□ -1.73
NEDD4-211ENST00000514893 DTX4Q9Y2E6 619 aa4.27□□□□□ -1.73
NEDD4-211ENST00000514893 LOC102724159A0A0B4J2E5 919 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 SRRM3A6NNA2 597 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-211ENST00000514893 IL18RAPO95256 599 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 LCATP04180 440 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 LCKP06239 509 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 ATICP31939 592 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 GSTM5P46439 218 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 CLCN5P51795 746 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 ZP1P60852 638 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 PWP2Q15269 919 aaKnown RBP4.26□□□□□ -1.73
NEDD4-211ENST00000514893 CEP85LQ5SZL2 805 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 DCAF12L2Q5VW00 463 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 CCDC144NLQ6NUI1 221 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 KDELC2Q7Z4H8 507 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 SESTD1Q86VW0 696 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 MUC20Q8N307 709 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-211ENST00000514893 SRFBP1Q8NEF9 429 aaKnown RBP4.26□□□□□ -1.73
NEDD4-211ENST00000514893 SNX22Q96L94 193 aa4.26□□□□□ -1.73
NEDD4-211ENST00000514893 CATSPERBQ9H7T0 1116 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms