RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 DUS2Q9NX74 493 aaKnown RBP20.93■□□□□ 0.94
USP53-208ENST00000514305 NUDT5Q9UKK9 219 aa20.93■□□□□ 0.94
USP53-208ENST00000514305 TLR6Q9Y2C9 796 aa20.93■□□□□ 0.94
USP53-208ENST00000514305 CEP250Q9BV73 2442 aa20.93■□□□□ 0.94
USP53-208ENST00000514305 ATG2BQ96BY7 2078 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 E2F8A0AVK6 867 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 C2CD4BA6NLJ0 364 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 M0QYT0 321 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 LEFTY2O00292 366 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 TRDMT1O14717 391 aaKnown RBP20.92■□□□□ 0.94
USP53-208ENST00000514305 HOXA6P31267 233 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 CCR1P32246 355 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 RFC1P35251 1148 aaPredicted RBP20.92■□□□□ 0.94
USP53-208ENST00000514305 ZNF143P52747 638 aaPredicted RBP20.92■□□□□ 0.94
USP53-208ENST00000514305 DEUP1Q05D60 604 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 PIGHQ14442 188 aaPredicted RBP20.92■□□□□ 0.94
USP53-208ENST00000514305 IFI16Q16666 785 aaKnown RBP20.92■□□□□ 0.94
USP53-208ENST00000514305 PPP1R15BQ5SWA1 713 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 SYPL2Q5VXT5 272 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 RAD9BQ6WBX8 426 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 STRADAQ7RTN6 431 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 RIN3Q8TB24 985 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 OSCP1Q8WVF1 389 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 OTUB2Q96DC9 234 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 NPY6RQ99463 290 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 DDX50Q9BQ39 737 aaKnown RBP20.92■□□□□ 0.94
USP53-208ENST00000514305 CNPY3Q9BT09 278 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 DDIT4Q9NX09 232 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 SMPD4Q9NXE4 827 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 IP6K2Q9UHH9 426 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 SFMBT1Q9UHJ3 866 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 CDV3Q9UKY7 258 aaKnown RBP20.92■□□□□ 0.94
USP53-208ENST00000514305 CACNA1AO00555 2505 aa20.92■□□□□ 0.94
USP53-208ENST00000514305 TCRBV5S1A1TA0A578 114 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 OTOL1A6NHN0 477 aaPredicted RBP20.91■□□□□ 0.94
USP53-208ENST00000514305 LATS1O95835 1130 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 RETP07949 1114 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 DRD1P21728 446 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 RDXP35241 583 aaKnown RBP20.91■□□□□ 0.94
USP53-208ENST00000514305 FLT3P36888 993 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 VAV2P52735 878 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 SPEM2Q0P670 501 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 KIF5AQ12840 1032 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 USP4Q13107 963 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 ZNF77Q15935 545 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 ARL13BQ3SXY8 428 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 BRMS1LQ5PSV4 323 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 FSTL4Q6MZW2 842 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 CEP68Q76N32 757 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 ATP6V0D2Q8N8Y2 350 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 ZNF564Q8TBZ8 553 aaPredicted RBP20.91■□□□□ 0.94
USP53-208ENST00000514305 RFFLQ8WZ73 363 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 NT5C3BQ969T7 300 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 SLC22A12Q96S37 553 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 P2RY13Q9BPV8 354 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 TSGA10Q9BZW7 698 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 ECT2Q9H8V3 914 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 C2orf42Q9NWW7 574 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 SLC8A2Q9UPR5 921 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 DNAH14Q0VDD8 3507 aa20.91■□□□□ 0.94
USP53-208ENST00000514305 A0A0A6YYK5 440 aaPredicted RBP20.9■□□□□ 0.94
USP53-208ENST00000514305 TMEM191CA6NGB0 347 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 IRAK2O43187 625 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 HRO43593 1189 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 LRP3O75074 770 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 CCDC175P0C221 793 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 PSMA2P25787 234 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 GJA4P35212 333 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 ARHGAP25P42331 645 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 NOP2P46087 812 aaKnown RBP20.9■□□□□ 0.94
USP53-208ENST00000514305 SLC11A2P49281 568 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 NR1H3Q13133 447 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 NME3Q13232 169 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 HTR3DQ70Z44 454 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 TAC4Q86UU9 113 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 WDR5BQ86VZ2 330 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 EMC1Q8N766 993 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 JOSD2Q8TAC2 188 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 AZIN2Q96A70 460 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 WDCPQ9H6R7 721 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 CFAP97Q9P2B7 532 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 ANAPC7Q9UJX3 599 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 WNT6Q9Y6F9 365 aa20.9■□□□□ 0.94
USP53-208ENST00000514305 MDM4O15151 490 aa20.89■□□□□ 0.93
USP53-208ENST00000514305 RNF40O75150 1001 aa20.89■□□□□ 0.93
USP53-208ENST00000514305 IRF1P10914 325 aa20.89■□□□□ 0.93
USP53-208ENST00000514305 CHKAP35790 457 aa20.89■□□□□ 0.93
USP53-208ENST00000514305 RPL7AP62424 266 aaKnown RBP20.89■□□□□ 0.93
USP53-208ENST00000514305 SRSF5Q13243 272 aaKnown RBP20.89■□□□□ 0.93
USP53-208ENST00000514305 TCEAL1Q15170 157 aa20.89■□□□□ 0.93
USP53-208ENST00000514305 FBXO43Q4G163 708 aa20.89■□□□□ 0.93
USP53-208ENST00000514305 DNAAF5Q86Y56 855 aa20.89■□□□□ 0.93
USP53-208ENST00000514305 CFAP57Q96MR6 1250 aa20.89■□□□□ 0.93
USP53-208ENST00000514305 PACSIN1Q9BY11 444 aa20.89■□□□□ 0.93
USP53-208ENST00000514305 PARD6AQ9NPB6 346 aa20.89■□□□□ 0.93
USP53-208ENST00000514305 SYNJ2BP-COX16A0A087WUM0 186 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 BTNL10A8MVZ5 291 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 KRT86O43790 486 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 STC2O76061 302 aa20.88■□□□□ 0.93
USP53-208ENST00000514305 ENDOD1O94919 500 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms