RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 LOXL4Q96JB6 756 aa10.06□□□□□ -0.8
RNF4-221ENST00000513643 C1orf74Q96LT6 269 aa10.06□□□□□ -0.8
RNF4-221ENST00000513643 ZDHHC4Q9NPG8 344 aa10.06□□□□□ -0.8
RNF4-221ENST00000513643 DDIT4Q9NX09 232 aa10.06□□□□□ -0.8
RNF4-221ENST00000513643 SMG5Q9UPR3 1016 aaKnown RBP10.06□□□□□ -0.8
RNF4-221ENST00000513643 ABCA7Q8IZY2 2146 aa10.06□□□□□ -0.8
RNF4-221ENST00000513643 IGLV3-10A0A075B6K4 115 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 LRRC53A6NM62 1247 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 DRGXA6NNA5 263 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 WASH3PC4AMC7 463 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 M0QYT0 321 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 TBL1XO60907 577 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 RPP40O75818 363 aaKnown RBP10.05□□□□□ -0.8
RNF4-221ENST00000513643 ADCY5O95622 1261 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 F9P00740 461 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 APOEP02649 317 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 RETP07949 1114 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 PABPC1P11940 636 aaKnown RBP10.05□□□□□ -0.8
RNF4-221ENST00000513643 GABRG2P18507 467 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 CD70P32970 193 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 P2RY2P41231 377 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 IL12RB1P42701 662 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
RNF4-221ENST00000513643 PLK1P53350 603 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 C1QBPQ07021 282 aaKnown RBP10.05□□□□□ -0.8
RNF4-221ENST00000513643 SIM2Q14190 667 aaPredicted RBP10.05□□□□□ -0.8
RNF4-221ENST00000513643 ARID5BQ14865 1188 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 MAP7D1Q3KQU3 841 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 PLK5Q496M5 336 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 CCDC14Q49A88 953 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 FILIP1LQ4L180 1135 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 FSCBQ5H9T9 825 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 BRMS1LQ5PSV4 323 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 FAM102AQ5T9C2 384 aaPredicted RBP10.05□□□□□ -0.8
RNF4-221ENST00000513643 HGSNATQ68CP4 663 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 LAIR1Q6GTX8 287 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 ACAD10Q6JQN1 1059 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 FBXL22Q6P050 247 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 DCLK2Q8N568 766 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 ATP6V0D2Q8N8Y2 350 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 ZNF557Q8N988 423 aaPredicted RBP10.05□□□□□ -0.8
RNF4-221ENST00000513643 KDM1BQ8NB78 822 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 SYN2Q92777 582 aaPredicted RBP10.05□□□□□ -0.8
RNF4-221ENST00000513643 IGSF8Q969P0 613 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 ALG14Q96F25 216 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 TBCBQ99426 244 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 DUSP15Q9H1R2 295 aaPredicted RBP10.05□□□□□ -0.8
RNF4-221ENST00000513643 PDCL3Q9H2J4 239 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 SYNCQ9H7C4 482 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 FAM204AQ9H8W3 233 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 ABCB8Q9NUT2 735 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 ZNF212Q9UDV6 495 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 GGA2Q9UJY4 613 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 OR51B4Q9Y5P0 310 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 HS3ST4Q9Y661 456 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 STON1Q9Y6Q2 735 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 SPAG17Q6Q759 2223 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 EML5Q05BV3 1969 aa10.05□□□□□ -0.8
RNF4-221ENST00000513643 SIGLEC16A6NMB1 481 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 DDX3XO00571 662 aaKnown RBP eCLIP10.04□□□□□ -0.82e-8■■■□□ 17.9
RNF4-221ENST00000513643 LRP3O75074 770 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 PAGE1O75459 146 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 LUC7L3O95232 432 aaKnown RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 CCDC172P0C7W6 258 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 HOXB2P14652 356 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 ABCB4P21439 1286 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 RFC1P35251 1148 aaPredicted RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 PTPN9P43378 593 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 ATXN1P54253 815 aaKnown RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 UBASH3AP57075 661 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 RNASE9P60153 205 aaKnown RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 LMAN2Q12907 356 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 CAMK2GQ13555 558 aaPredicted RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 AUHQ13825 339 aaKnown RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 ZNF234Q14588 700 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 E2F5Q15329 346 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 NFKBIBQ15653 356 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 FUT11Q495W5 492 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 PLA2G2CQ5R387 149 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 ACBD5Q5T8D3 534 aaPredicted RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 RAP1GAP2Q684P5 730 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 ANO7Q6IWH7 933 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 CXorf57Q6NSI4 855 aaKnown RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 LRSAM1Q6UWE0 723 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 CACNA2D4Q7Z3S7 1137 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 ZNF571Q7Z3V5 609 aaPredicted RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 C14orf80Q86SX3 495 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 KBTBD6Q86V97 674 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 CHPFQ8IZ52 775 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 MCOLN2Q8IZK6 566 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 AHI1Q8N157 1196 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 CFAP52Q8N1V2 620 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 FAM160A2Q8N612 972 aaPredicted RBP10.04□□□□□ -0.8
RNF4-221ENST00000513643 MSANTD4Q8NCY6 345 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 C3orf20Q8ND61 904 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 JOSD2Q8TAC2 188 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 SORCS1Q8WY21 1168 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 VCPIP1Q96JH7 1222 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 MRGPRX3Q96LB0 322 aa10.04□□□□□ -0.8
RNF4-221ENST00000513643 MRGPRX1Q96LB2 322 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms