RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 RXRGP48443 463 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 PPP2R2AP63151 447 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 SP2Q02086 613 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 CUL3Q13618 768 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 DMC1Q14565 340 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 SMTNL2Q2TAL5 461 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RARS2Q5T160 578 aaKnown RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 FAXCQ5TGI0 409 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 SCAIQ8N9R8 606 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 VMP1Q96GC9 406 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 KCNK16Q96T55 309 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 ATP6V1HQ9UI12 483 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 MRTO4Q9UKD2 239 aaKnown RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 GNG14A0A1W2PPG7 69 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TBC1D4O60343 1298 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 VPS4BO75351 444 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 CYP1A1P04798 512 aaPredicted RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 COX7A2P14406 83 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 DDX6P26196 483 aaKnown RBP eCLIP4.35□□□□□ -1.71
VCAN-209ENST00000513016 AKT2P31751 481 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RHBDL3P58872 404 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 PRKCZQ05513 592 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TJAP1Q5JTD0 557 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 BRMS1LQ5PSV4 323 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 SLC22A17Q8WUG5 538 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 OSBPL10Q9BXB5 764 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 PARD6BQ9BYG5 372 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RRAGDQ9NQL2 400 aaPredicted RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 POLG2Q9UHN1 485 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 A0A0A6YYK5 440 aaPredicted RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 SUPT7LO94864 414 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 SLC35G4P0C7Q5 338 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 COL6A1P12109 1028 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 RPL21P46778 160 aaKnown RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 CD151P48509 253 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 AP2B1P63010 937 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 BTKQ06187 659 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 STX5Q13190 355 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 PDE1CQ14123 709 aaPredicted RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 DNAL1Q4LDG9 190 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 AVL9Q8NBF6 648 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 TAS1R2Q8TE23 839 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 PAWRQ96IZ0 340 aaKnown RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 ZFYVE19Q96K21 471 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 TCF25Q9BQ70 676 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 ECSITQ9BQ95 431 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 CARD9Q9H257 536 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 NMRAL1Q9HBL8 299 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 ZSCAN32Q9NX65 697 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 CLDND1Q9NY35 253 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 GULP1Q9UBP9 304 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 SNX12Q9UMY4 172 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 NDRG2Q9UN36 371 aaKnown RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 ITSN1Q15811 1721 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 KIDINS220Q9ULH0 1771 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 REREQ9P2R6 1566 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 TCRBV5S4A2TA0A5A2 114 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 SGTAO43765 313 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 ASLP04424 464 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 PON1P27169 355 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 NTSP30990 170 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 RPA3P35244 121 aaPredicted RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 SPIDRQ14159 915 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 ZSCAN26Q16670 478 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 C1orf146Q5VVC0 180 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 LVRNQ6Q4G3 990 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 SPOCD1Q6ZMY3 1216 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 TFAP2DQ7Z6R9 452 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 COLGALT1Q8NBJ5 622 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 MYLPFQ96A32 169 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 POP1Q99575 1024 aaKnown RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 TKTL2Q9H0I9 626 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 BLOC1S6Q9UL45 172 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 RUVBL2Q9Y230 463 aaKnown RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 AP3M1Q9Y2T2 418 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 A0A0G2JLL6 359 aaPredicted RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 IFNA16P05015 189 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 GLI1P08151 1106 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 IMPDH2P12268 514 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 TYMPP19971 482 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 CRABP2P29373 138 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 COILP38432 576 aaPredicted RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 RPL3P39023 403 aaKnown RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 CASP8Q14790 479 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 USP39Q53GS9 565 aaKnown RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 EOGTQ5NDL2 527 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 PRRT2Q7Z6L0 340 aaPredicted RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 SLC13A5Q86YT5 568 aaPredicted RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 POMGNT2Q8NAT1 580 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 ASB2Q96Q27 587 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 ILKAPQ9H0C8 392 aaPredicted RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 IARS2Q9NSE4 1012 aaKnown RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 TRPC4Q9UBN4 977 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 PYCARDQ9ULZ3 195 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 ACOT9Q9Y305 439 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 PCDHGA4Q9Y5G9 962 aa4.34□□□□□ -1.71
VCAN-209ENST00000513016 ERI2A8K979 691 aaKnown RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 FOXN3O00409 490 aaPredicted RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 CSDE1O75534 798 aaKnown RBP4.34□□□□□ -1.71
VCAN-209ENST00000513016 STAU1O95793 577 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms