RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 ELOVL2Q9NXB9 296 aa6.75□□□□□ -1.33
KDM3B-208ENST00000512928 SLC12A6Q9UHW9 1150 aa6.75□□□□□ -1.33
KDM3B-208ENST00000512928 GGA2Q9UJY4 613 aa6.75□□□□□ -1.33
KDM3B-208ENST00000512928 HCN2Q9UL51 889 aa6.75□□□□□ -1.33
KDM3B-208ENST00000512928 PCDHGC3Q9UN70 934 aa6.75□□□□□ -1.33
KDM3B-208ENST00000512928 PLA2G4CQ9UP65 541 aa6.75□□□□□ -1.33
KDM3B-208ENST00000512928 SLC27A6Q9Y2P4 619 aa6.75□□□□□ -1.33
KDM3B-208ENST00000512928 RALGAPA1Q6GYQ0 2036 aa6.75□□□□□ -1.33
KDM3B-208ENST00000512928 MYOFQ9NZM1 2061 aa6.75□□□□□ -1.33
KDM3B-208ENST00000512928 EML5Q05BV3 1969 aa6.75□□□□□ -1.33
KDM3B-208ENST00000512928 F5H5T6 163 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 M0QYT0 321 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 GFRA2O00451 464 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 NPC1O15118 1278 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 AP5Z1O43299 807 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 GDF9O60383 454 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 FOXD2O60548 495 aaPredicted RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 LRP3O75074 770 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 NDUFS2O75306 463 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 ZNF217O75362 1048 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 DAB1O75553 588 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 IGLV3-27P01718 113 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 CFIP05156 583 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 ATP5BP06576 529 aaKnown RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 MMEP08473 750 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 CHRM1P11229 460 aaPredicted RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 ACADMP11310 421 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PABPC1P11940 636 aaKnown RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 HLA-EP13747 358 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 TACR2P21452 398 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 SDHBP21912 280 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PRKCHP24723 683 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 CCR1P32246 355 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 CD70P32970 193 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 P2RY2P41231 377 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PTGER3P43115 390 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 RPL34P49207 117 aaKnown RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 SULT1E1P49888 294 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 ST8SIA6P61647 398 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 RPS24P62847 133 aaKnown RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PITX1P78337 314 aaPredicted RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 SLC6A3Q01959 620 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PUM1Q14671 1186 aaKnown RBP eCLIP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 FUT11Q495W5 492 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PTPN20Q4JDL3 420 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 MS4A13Q5J8X5 152 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PIK3R6Q5UE93 754 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 NAA35Q5VZE5 725 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 RNF219Q5W0B1 726 aaPredicted RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 LYSMD4Q5XG99 296 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PMS2CLQ68D20 193 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 MBLAC2Q68D91 279 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 IL31Q6EBC2 164 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 NADSYN1Q6IA69 706 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 LRSAM1Q6UWE0 723 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 OLFML1Q6UWY5 402 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 SND1Q7KZF4 910 aaKnown RBP eCLIP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PHLDB2Q86SQ0 1253 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 NOP9Q86U38 636 aaKnown RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 FAM124AQ86V42 546 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 ERICH1Q86X53 443 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 CIR1Q86X95 450 aaPredicted RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 RGL4Q8IZJ4 473 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 ATP6V0D2Q8N8Y2 350 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 ZNF557Q8N988 423 aaPredicted RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 OLIG1Q8TAK6 271 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 WFDC5Q8TCV5 224 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 NETO1Q8TDF5 533 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 WFIKKN2Q8TEU8 576 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 SLC20A1Q8WUM9 679 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 CPA5Q8WXQ8 436 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PRCCQ92733 491 aaPredicted RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 BTN2A3PQ96KV6 586 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 GABRG3Q99928 467 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 LHX5Q9H2C1 402 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PRDM16Q9HAZ2 1276 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 CD93Q9NPY3 652 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 VPS45Q9NRW7 570 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 THAP10Q9P2Z0 257 aaPredicted RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 XPO7Q9UIA9 1087 aaKnown RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 MBD1Q9UIS9 605 aaPredicted RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 STOML2Q9UJZ1 356 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 FBXO10Q9UK96 956 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 PCDHGA5Q9Y5G8 931 aa6.74□□□□□ -1.33
KDM3B-208ENST00000512928 MAP1BP46821 2468 aaKnown RBP6.74□□□□□ -1.33
KDM3B-208ENST00000512928 KMT2BQ9UMN6 2715 aaPredicted RBP6.73□□□□□ -1.33
KDM3B-208ENST00000512928 BCLAF3A2AJT9 711 aaKnown RBP6.73□□□□□ -1.33
KDM3B-208ENST00000512928 LGALS16A8MUM7 142 aa6.73□□□□□ -1.33
KDM3B-208ENST00000512928 KCNU1A8MYU2 1149 aa6.73□□□□□ -1.33
KDM3B-208ENST00000512928 PATE3B3GLJ2 98 aa6.73□□□□□ -1.33
KDM3B-208ENST00000512928 KHNYNO15037 678 aaKnown RBP6.73□□□□□ -1.33
KDM3B-208ENST00000512928 EPHB6O15197 1021 aa6.73□□□□□ -1.33
KDM3B-208ENST00000512928 TIMM44O43615 452 aa6.73□□□□□ -1.33
KDM3B-208ENST00000512928 LUC7L3O95232 432 aaKnown RBP6.73□□□□□ -1.33
KDM3B-208ENST00000512928 MOCS3O95396 460 aa6.73□□□□□ -1.33
KDM3B-208ENST00000512928 LSM8O95777 96 aaKnown RBP6.73□□□□□ -1.33
KDM3B-208ENST00000512928 GLI1P08151 1106 aa6.73□□□□□ -1.33
KDM3B-208ENST00000512928 ZNF806P0C7X5 589 aa6.73□□□□□ -1.33
KDM3B-208ENST00000512928 SLC2A3P11169 496 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms