RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 DAOAP59103 153 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 ST8SIA6P61647 398 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 BNC1Q01954 994 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 NNTQ13423 1086 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 GOLGA7BQ2TAP0 167 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 PIK3R6Q5UE93 754 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 TCERG1LQ5VWI1 586 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 MBLAC2Q68D91 279 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 CHST9Q7L1S5 443 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 CCDC117Q8IWD4 279 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-216ENST00000512683 FIBINQ8TAL6 211 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 SORCS1Q8WY21 1168 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 IGSF8Q969P0 613 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 TRIM62Q9BVG3 475 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 PRSS16Q9NQE7 514 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 ABCB8Q9NUT2 735 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 GGA2Q9UJY4 613 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 MAN1B1Q9UKM7 699 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 ASPMQ8IZT6 3477 aa13.08□□□□□ -0.32
VEGFA-216ENST00000512683 TARSL2A2RTX5 802 aaKnown RBP13.07□□□□□ -0.32
VEGFA-216ENST00000512683 TYW5A2RUC4 315 aaKnown RBP13.07□□□□□ -0.32
VEGFA-216ENST00000512683 SART1O43290 800 aaKnown RBP13.07□□□□□ -0.32
VEGFA-216ENST00000512683 TNFSF14O43557 240 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 ACSL4O60488 711 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 GRK6P43250 576 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 RPS14P62263 151 aaKnown RBP13.07□□□□□ -0.32
VEGFA-216ENST00000512683 ADIGQ0VDE8 80 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 PTPRNQ16849 979 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 INAVAQ3KP66 663 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 ZNF776Q68DI1 518 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-216ENST00000512683 FOXR2Q6PJQ5 311 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 SLCO6A1Q86UG4 719 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 UBR7Q8N806 425 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 SLC35C1Q96A29 364 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 ERLEC1Q96DZ1 483 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 DHTKD1Q96HY7 919 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-216ENST00000512683 CEP63Q96MT8 703 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 SFMBT1Q9UHJ3 866 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 ANKRD6Q9Y2G4 727 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 PI4KAP42356 2102 aa13.07□□□□□ -0.32
VEGFA-216ENST00000512683 A0A1B0GVT2 93 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 PPP1R3GB7ZBB8 358 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 TULP2O00295 520 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 SRPRAP08240 638 aaKnown RBP13.06□□□□□ -0.32
VEGFA-216ENST00000512683 ACSL1P33121 698 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 RPL34P49207 117 aaKnown RBP13.06□□□□□ -0.32
VEGFA-216ENST00000512683 CSNK1EP49674 416 aaKnown RBP13.06□□□□□ -0.32
VEGFA-216ENST00000512683 RACK1P63244 317 aaKnown RBP13.06□□□□□ -0.32
VEGFA-216ENST00000512683 STIM1Q13586 685 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 MEA1Q16626 185 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 KIF19Q2TAC6 998 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 DCAF17Q5H9S7 520 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-216ENST00000512683 TTI2Q6NXR4 508 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 PNPLA1Q8N8W4 532 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 UBA3Q8TBC4 463 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 NDRG1Q92597 394 aaKnown RBP13.06□□□□□ -0.32
VEGFA-216ENST00000512683 EDEM1Q92611 657 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 BIRC7Q96CA5 298 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 LMLNQ96KR4 655 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 NT5C1BQ96P26 610 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 RSPH9Q9H1X1 276 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-216ENST00000512683 C6orf106Q9H6K1 298 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-216ENST00000512683 IL21RQ9HBE5 538 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 TM9SF3Q9HD45 589 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 FNDC3AQ9Y2H6 1198 aaKnown RBP13.06□□□□□ -0.32
VEGFA-216ENST00000512683 GPSM3Q9Y4H4 160 aa13.06□□□□□ -0.32
VEGFA-216ENST00000512683 ANKRD11Q6UB99 2663 aaPredicted RBP13.06□□□□□ -0.32
VEGFA-216ENST00000512683 ZZEF1O43149 2961 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 PSMA7O14818 248 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 VILLO15195 856 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 YKT6O15498 198 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 MOCS3O95396 460 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 LTFP02788 710 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 C1SP09871 688 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 HLA-EP13747 358 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 CTSKP43235 329 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 ACADSBP45954 432 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 CCT8P50990 548 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 TBX4P57082 545 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 MTA1Q13330 715 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 SLC12A1Q13621 1099 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 MORC3Q14149 939 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 HNRNPA1L2Q32P51 320 aaKnown RBP13.05□□□□□ -0.32
VEGFA-216ENST00000512683 PMF1Q6P1K2 205 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 FAM124AQ86V42 546 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 HJURPQ8NCD3 748 aaPredicted RBP13.05□□□□□ -0.32
VEGFA-216ENST00000512683 STK32AQ8WU08 396 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 CYB5D2Q8WUJ1 264 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 SERPINB11Q96P15 392 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 PPP1R9BQ96SB3 815 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 SCUBE2Q9NQ36 999 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 ADAMTS1Q9UHI8 967 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 RALYQ9UKM9 306 aaKnown RBP13.05□□□□□ -0.32
VEGFA-216ENST00000512683 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.05□□□□□ -0.32
VEGFA-216ENST00000512683 TLR6Q9Y2C9 796 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 PCDHGA1Q9Y5H4 931 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 SNX11Q9Y5W9 270 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 CEP192Q8TEP8 1941 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 PCDH15Q96QU1 1955 aa13.05□□□□□ -0.32
VEGFA-216ENST00000512683 A0A1W2PPC4 97 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms