RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	RAD51AP2	Q09MP3	1159 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	MORC3	Q14149	939 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	SOWAHA	Q2M3V2	549 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	RNFT1	Q5M7Z0	435 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	SNX30	Q5VWJ9	437 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	TMEM215	Q68D42	235 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	KCTD17	Q8N5Z5	321 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	ZNF366	Q8N895	744 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	OR4C6	Q8NH72	309 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	NANOS1	Q8WY41	292 aa	Known RBP	10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	PCED1B	Q96HM7	432 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	PIWIL1	Q96J94	861 aa	Known RBP	10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	KDM4C	Q9H3R0	1056 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	GDAP2	Q9NXN4	497 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900		U3KQA8	63 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	VPS37C	A5D8V6	355 aa	Predicted RBP	10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	RTN2	O75298	545 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	PIGR	P01833	764 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	DNTT	P04053	509 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	ITGA2B	P08514	1039 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	THEGL	P0DJG4	465 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	GIMD1	P0DJR0	217 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	YWHAQ	P27348	245 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	MCM7	P33993	719 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	KRT2	P35908	639 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	PGF	P49763	221 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	SMTN	P53814	917 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	ZBTB16	Q05516	673 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	AAMP	Q13685	434 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	TOB2	Q14106	344 aa	Predicted RBP	10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	HAUS3	Q68CZ6	603 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	NCEH1	Q6PIU2	408 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	VWA5B2	Q8N398	1253 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	TOP6BL	Q8N6T0	577 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	PDZD8	Q8NEN9	1154 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	CXorf38	Q8TB03	319 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	SSC4D	Q8WTU2	575 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	KBTBD7	Q8WVZ9	684 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	OVCA2	Q8WZ82	227 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	FBXO32	Q969P5	355 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	GRAMD1A	Q96CP6	724 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	ABCG4	Q9H172	646 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	TMEM245	Q9H330	911 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	CAAP1	Q9H8G2	361 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	UCKL1	Q9NWZ5	548 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	SERGEF	Q9UGK8	458 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	CDH9	Q9ULB4	789 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	AGAP1	Q9UPQ3	857 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	SNX9	Q9Y5X1	595 aa		10.07	□□□□□ -0.8
PTPN20-223	ENST00000509900	SPG11	Q96JI7	2443 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	FFAR2	O15552	330 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	PENK	P01210	267 aa	Predicted RBP	10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	ITGB3	P05106	788 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	OR52Z1	P0C646	297 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	ZDHHC11B	P0C7U3	371 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	XBP1	P17861	261 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	GUCY2C	P25092	1073 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	SLC5A2	P31639	672 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	UQCRFS1	P47985	274 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	NCKAP1L	P55160	1127 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	OXCT1	P55809	520 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	EIF4H	Q15056	248 aa	Known RBP	10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	TTC31	Q49AM3	519 aa	Predicted RBP	10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	FYB2	Q5VWT5	728 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	LIMS2	Q7Z4I7	341 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	ANKS1B	Q7Z6G8	1248 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	VASH2	Q86V25	355 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	NUP93	Q8N1F7	819 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	SVOP	Q8N4V2	548 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	C1orf127	Q8N9H9	656 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	WDR36	Q8NI36	951 aa	Known RBP	10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	MAPK15	Q8TD08	544 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	KCNN1	Q92952	543 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	KCNB2	Q92953	911 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	SERAC1	Q96JX3	654 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	FAM84A	Q96KN4	292 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	APOLD1	Q96LR9	279 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	CIPC	Q9C0C6	399 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	PRSS16	Q9NQE7	514 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	CLEC4E	Q9ULY5	219 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	SHANK1	Q9Y566	2161 aa		10.06	□□□□□ -0.8
PTPN20-223	ENST00000509900	MTSS1	O43312	755 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	TBX18	O95935	607 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	PDGFRB	P09619	1106 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	PLCG1	P19174	1290 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	DGKA	P23743	735 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	GSK3A	P49840	483 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	STK3	Q13188	491 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	KCNAB2	Q13303	367 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	MAPRE1	Q15691	268 aa	Known RBP	10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	CPLX2	Q6PUV4	134 aa	Known RBP	10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	CRELD2	Q6UXH1	353 aa	Predicted RBP	10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	USP30	Q70CQ3	517 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	KCNK18	Q7Z418	384 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	C14orf80	Q86SX3	495 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	ATCAY	Q86WG3	371 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	TMEM151A	Q8N4L1	468 aa		10.05	□□□□□ -0.8
PTPN20-223	ENST00000509900	MFSD2A	Q8NA29	543 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms