RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 CSGALNACT1Q8TDX6 532 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 CD101Q93033 1021 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 NT5C3BQ969T7 300 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 PLD4Q96BZ4 506 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 MSANTD3Q96H12 275 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 FAM81BQ96LP2 452 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 ACOX2Q99424 681 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 TBCBQ99426 244 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 NPY6RQ99463 290 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 PRMT1Q99873 361 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 MAGEB5Q9BZ81 275 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 TRIM7Q9C029 511 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 LMAN1LQ9HAT1 526 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 CD93Q9NPY3 652 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 METTL5Q9NRN9 209 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 PIGVQ9NUD9 493 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 ASNSD1Q9NWL6 643 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 PLK2Q9NYY3 685 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 SEPT3Q9UH03 358 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 FBXO10Q9UK96 956 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 PCDHB11Q9Y5F2 797 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 DNMT3AQ9Y6K1 912 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 ZNF292O60281 2723 aa7.5□□□□□ -1.21
TOPBP1-207ENST00000509162 CKAP5Q14008 2032 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 SMTNL1A8MU46 457 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 KCNU1A8MYU2 1149 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 NEDD8-MDP1E9PL57 170 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 GOLGA8SH3BPF8 625 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 TSPAN3O60637 253 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 ADCY5O95622 1261 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 TRUB2O95900 331 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 SP9P0CG40 484 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 RALAP11233 206 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 SKILP12757 684 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 NCAM1P13591 858 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 TYRP14679 529 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 PTMSP20962 102 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 CDK11BP21127 795 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 NUMBP49757 651 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 SLC6A3Q01959 620 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 SRSF5Q13243 272 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 ARID5BQ14865 1188 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 SKOR2Q2VWA4 1001 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 ZC3H12AQ5D1E8 599 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 DGKKQ5KSL6 1271 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 EGFLAMQ63HQ2 1017 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 OR6B2Q6IFH4 312 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 CC2D1AQ6P1N0 951 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 WDR59Q6PJI9 974 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 TPGS1Q6ZTW0 290 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 CYP4V2Q6ZWL3 525 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 TRIM46Q7Z4K8 759 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 C14orf80Q86SX3 495 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 DDX42Q86XP3 938 aaKnown RBP eCLIP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 PHF13Q86YI8 300 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 ARHGAP18Q8N392 663 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 CPXM2Q8N436 756 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 TERB1Q8NA31 727 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 USP33Q8TEY7 942 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 FAM149B1Q96BN6 582 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 AGPAT1Q99943 283 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 P2RY13Q9BPV8 354 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 NACA2Q9H009 215 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 NAT10Q9H0A0 1025 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 ABCC13Q9NSE7 274 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 THG1LQ9NWX6 298 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 ZNF212Q9UDV6 495 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 SH3BP1Q9Y3L3 701 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 HBS1LQ9Y450 684 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 DAAM1Q9Y4D1 1078 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 PIEZO1Q92508 2521 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 ITIH6Q6UXX5 1313 aa7.49□□□□□ -1.21
TOPBP1-207ENST00000509162 TNRC6BQ9UPQ9 1833 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 A0A1W2PQJ5 194 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 C2CD4BA6NLJ0 364 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 CHURC1-FNTBB4DL54 471 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 SGK1O00141 431 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 MAN2B1O00754 1011 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 LILRB5O75023 590 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 HSF2BPO75031 334 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 PAPSS2O95340 614 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 MOCS2O96007 188 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 TCF4P15884 667 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 TRIM21P19474 475 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 HLA-FP30511 346 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 CD70P32970 193 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 ACADSBP45954 432 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 PXNP49023 591 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 TBX4P57082 545 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 SLC8A3P57103 927 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 RPS24P62847 133 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 RING1Q06587 406 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 TBX2Q13207 712 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 ASIC2Q16515 512 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 C15orf59Q2T9L4 293 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 FUT11Q495W5 492 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 CCDC14Q49A88 953 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 FSCBQ5H9T9 825 aa7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 FAM102AQ5T9C2 384 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-207ENST00000509162 RAP1GAP2Q684P5 730 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms