RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 HUNKP57058 714 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 ATG16L1Q676U5 607 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 CHSY1Q86X52 802 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.28□□□□□ -0.6
SEC31A-228ENST00000509142 WNT8BQ93098 351 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 MTBPQ96DY7 904 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 GAD1Q99259 594 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 BTBD10Q9BSF8 475 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 ULBP1Q9BZM6 244 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 SLC38A7Q9NVC3 462 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 PCDHA11Q9Y5I1 949 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 DOCK3Q8IZD9 2030 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 DNAJC6O75061 913 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 RFPL1O75677 317 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 NEBLO76041 1014 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 CSH1P0DML2 217 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 CSH2P0DML3 217 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 MYL2P10916 166 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 CPA2P48052 419 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 RABGGTBP53611 331 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 CDK16Q00536 496 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 SEMA5AQ13591 1074 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 SYPL2Q5VXT5 272 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 ZNF534Q76KX8 674 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 RSPH3Q86UC2 560 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 MICAL1Q8TDZ2 1067 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 FAM136AQ96C01 138 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 P2RY11Q96G91 374 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 PRDM12Q9H4Q4 367 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 RCOR3Q9P2K3 495 aaPredicted RBP11.28□□□□□ -0.6
SEC31A-228ENST00000509142 DPPA5A6NC42 116 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 OPHN1O60890 802 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 HAUS5O94927 633 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 NCAM1P13591 858 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 MLH1P40692 756 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 PDE1BQ01064 536 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 GNASQ5JWF2 1037 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 RNF34Q969K3 372 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 AGAP3Q96P47 875 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 SYT15Q9BQS2 421 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 NMRK1Q9NWW6 199 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 ZSWIM8A7E2V4 1837 aa11.28□□□□□ -0.6
SEC31A-228ENST00000509142 TRIP12Q14669 1992 aaPredicted RBP11.27□□□□□ -0.6
SEC31A-228ENST00000509142 TBX10O75333 385 aa11.27□□□□□ -0.6
SEC31A-228ENST00000509142 THP07101 528 aa11.27□□□□□ -0.6
SEC31A-228ENST00000509142 VAV1P15498 845 aa11.27□□□□□ -0.6
SEC31A-228ENST00000509142 TPI1P60174 286 aa11.27□□□□□ -0.6
SEC31A-228ENST00000509142 NBPF20Q3BBV1 942 aa11.27□□□□□ -0.6
SEC31A-228ENST00000509142 MORN1Q5T089 497 aa11.27□□□□□ -0.6
SEC31A-228ENST00000509142 TAF2Q6P1X5 1199 aa11.27□□□□□ -0.6
SEC31A-228ENST00000509142 CLEC20AQ6ZU45 233 aa11.27□□□□□ -0.6
SEC31A-228ENST00000509142 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.27□□□□□ -0.6
SEC31A-228ENST00000509142 UCMAQ8WVF2 138 aa11.27□□□□□ -0.6
SEC31A-228ENST00000509142 E2F7Q96AV8 911 aa11.27□□□□□ -0.6
SEC31A-228ENST00000509142 MTO1Q9Y2Z2 717 aaKnown RBP11.27□□□□□ -0.6
SEC31A-228ENST00000509142 PLLPQ9Y342 182 aa11.27□□□□□ -0.6
SEC31A-228ENST00000509142 KCNK1O00180 336 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 PDHA1P08559 390 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 ATP6V1C1P21283 382 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 MGAT1P26572 445 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 RGS2P41220 211 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 ERFP50548 548 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 SESN3P58005 492 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 ADAM17P78536 824 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 CHI3L2Q15782 390 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 RFX8Q6ZV50 586 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 HFE2Q6ZVN8 426 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 PSTKQ8IV42 348 aaKnown RBP11.27□□□□□ -0.61
SEC31A-228ENST00000509142 KBTBD2Q8IY47 623 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 PHC3Q8NDX5 983 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 APBB2Q92870 758 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 ATP2A3Q93084 1043 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 ZNF333Q96JL9 665 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 CDY2AQ9Y6F7 541 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.27□□□□□ -0.61
SEC31A-228ENST00000509142 CAPN14A8MX76 684 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 HAS3O00219 553 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 PTGESO14684 152 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 TNPO2O14787 897 aaKnown RBP11.27□□□□□ -0.61
SEC31A-228ENST00000509142 GSRP00390 522 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 PSMB4P28070 264 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 LHX1P48742 406 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 RPL34P49207 117 aaKnown RBP11.27□□□□□ -0.61
SEC31A-228ENST00000509142 ARL13BQ3SXY8 428 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 XKR4Q5GH76 650 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 UNC5BQ8IZJ1 945 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 NSL1Q96IY1 281 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 OSBPL1AQ9BXW6 950 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 DDIT4Q9NX09 232 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 CORO1CQ9ULV4 474 aaPredicted RBP11.27□□□□□ -0.61
SEC31A-228ENST00000509142 ST3GAL5Q9UNP4 418 aa11.27□□□□□ -0.61
SEC31A-228ENST00000509142 FCHO1O14526 889 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 DGKIO75912 1065 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 FBXO21O94952 628 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 USP17L7P0C7H9 530 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 KITP10721 976 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 LRPAP1P30533 357 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 ZNF157P51786 506 aaPredicted RBP11.26□□□□□ -0.61
SEC31A-228ENST00000509142 TEX44Q53QW1 395 aa11.26□□□□□ -0.61
SEC31A-228ENST00000509142 DNAAF3Q8N9W5 541 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms