RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ERN1O75460 977 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 AZGP1P25311 298 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SERPINA4P29622 427 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 WDR4P57081 412 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 FKBP1AP62942 108 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 TMEM201Q5SNT2 666 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MAEAQ7L5Y9 396 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CPNE8Q86YQ8 564 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 DRAXINQ8NBI3 349 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 RBBP8NLQ8NC74 664 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 KIAA0895Q8NCT3 520 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 TMEM104Q8NE00 496 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MAIP1Q8WWC4 291 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 FAM162AQ96A26 154 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 FAM120BQ96EK7 910 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CCDC140Q96MF4 163 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 LDAHQ9H6V9 325 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 UBTD1Q9HAC8 227 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ETNK2Q9NVF9 386 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 NDE1Q9NXR1 346 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ITGA11Q9UKX5 1188 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 WDR33Q9C0J8 1336 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 RBBP6Q7Z6E9 1792 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 TCRBV5S4A2TA0A5A2 114 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MAGEB16A2A368 324 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 B4E171 279 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 STX16-NPEPL1H3BU86 382 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 STX16O14662 325 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF213O14771 459 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ADCY6O43306 1168 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ZC3H11AO75152 810 aaKnown RBP eCLIP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SCAF4O95104 1147 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 PRLP01236 227 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 NME1P15531 152 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 DRD1P21728 446 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 PRKAR1BP31321 381 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 LTBRP36941 435 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 STAT5AP42229 794 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MAGEA9P43362 315 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SMSP52788 366 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MGAT5Q09328 741 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CCDC15Q0P6D6 951 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SCAPQ12770 1279 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 POU4F2Q12837 409 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SF3A3Q12874 501 aaKnown RBP eCLIP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 PLA2G7Q13093 441 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SLC29A2Q14542 456 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 PDK1Q15118 436 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 NAB2Q15742 525 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MAPKAPK3Q16644 382 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 BRICD5Q6PL45 260 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SZRD1Q7Z422 152 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CCDC83Q8IWF9 413 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 FNIP1Q8TF40 1166 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF75CPQ92670 426 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ATG4CQ96DT6 458 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ALS2CR12Q96Q35 445 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CAMKK2Q96RR4 588 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CRAMP1Q96RY5 1269 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ERP44Q9BS26 406 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 TDRD1Q9BXT4 1180 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MS4A5Q9H3V2 200 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ACSS2Q9NR19 701 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 PPP1R14DQ9NXH3 145 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MARCH2Q9P0N8 246 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 PDP2Q9P2J9 529 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MAD2L2Q9UI95 211 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CLEC4AQ9UMR7 237 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 HIF3AQ9Y2N7 669 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MYH1P12882 1939 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ROBO3Q96MS0 1386 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SH2D7A6NKC9 451 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 EFCAB8A8MWE9 144 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 H0YIN7 160 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CCNT1O60563 726 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 MAFO75444 373 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 PRDM1O75626 825 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CAVIN2O95810 425 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 LMNAP02545 664 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 FYNP06241 537 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 AMPD1P23109 780 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 PKLRP30613 574 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 GSK3AP49840 483 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 HIRAP54198 1017 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 GSTO1P78417 241 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CYP27A1Q02318 531 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 FSTL1Q12841 308 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 GIT2Q14161 759 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 TRADDQ15628 312 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 AMZ1Q400G9 498 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 ARHGEF16Q5VV41 709 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 RAET1GQ6H3X3 334 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CORO6Q6QEF8 472 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 RBM43Q6ZSC3 357 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 FAM35AQ86V20 835 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 C19orf47Q8N9M1 422 aaKnown RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 NR1H4Q96RI1 486 aaPredicted RBP4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CD180Q99467 661 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 SSX3Q99909 188 aa4.03□□□□□ -1.76
NEDD4-209ENST00000508871 CRNKL1Q9BZJ0 848 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms