RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PTCD3Q96EY7 689 aaKnown RBP11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 TBCBQ99426 244 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 RTP3Q9BQQ7 232 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 DNAI2Q9GZS0 605 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 PCDH18Q9HCL0 1135 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 KCNK4Q9NYG8 393 aa11.36□□□□□ -0.59
SH3RF1-203ENST00000508685 TCRBV9S1A1TA0A576 114 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 ZNF487B1APH4 448 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 COPEO14579 308 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 MDM4O15151 490 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 GYG2O15488 501 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 GSC2O15499 205 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SMNDC1O75940 238 aaKnown RBP eCLIP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 GRK4P32298 578 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 MAGEA6P43360 314 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 DCAF6Q58WW2 860 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 CAPRIN2Q6IMN6 1127 aaKnown RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 C1orf228Q6PIY5 440 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 CD300LGQ6UXG3 332 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SH2D5Q6ZV89 423 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 ZNF598Q86UK7 904 aaKnown RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 RTN4RL1Q86UN2 441 aaPredicted RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 DEFB106AQ8N104 65 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 PQLC3Q8N755 202 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 PLD5Q8N7P1 536 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 PCDH19Q8TAB3 1148 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SKA1Q96BD8 255 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 C7orf26Q96N11 449 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 RNF157Q96PX1 679 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SMOQ99835 787 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SIKE1Q9BRV8 207 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 DENND2DQ9H6A0 471 aaPredicted RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 STARD7Q9NQZ5 370 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 TSC2P49815 1807 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 TDRD15B5MCY1 1934 aaKnown RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SYNJ2BP-COX16A0A087WUM0 186 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 A0A0G2JND7 137 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 WDR91A4D1P6 747 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 BANF1O75531 89 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 AP1G2O75843 785 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 KRT38O76015 456 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 MYCP01106 439 aaPredicted RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 ESRRAP11474 423 aaPredicted RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SCNN1AP37088 669 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 VHLP40337 213 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 MATKP42679 507 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SERPINB4P48594 390 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 TKTL1P51854 596 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 YWHAGP61981 247 aaKnown RBP eCLIP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 MRPS5P82675 430 aaKnown RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 GAD2Q05329 585 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 GRIK3Q13003 919 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 EFTUD2Q15029 972 aaKnown RBP eCLIP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 PLEKHG4Q58EX7 1191 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 OTUD1Q5VV17 481 aaPredicted RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 HFE2Q6ZVN8 426 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 ARCQ7LC44 396 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 LRRC6Q86X45 466 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 FAM131BQ86XD5 332 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 VPS52Q8N1B4 723 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SIX6OS1Q8N1H7 587 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SLAIN1Q8ND83 568 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 MCUQ8NE86 351 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 ZMIZ2Q8NF64 920 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 LRRN4Q8WUT4 740 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 TEKT4Q8WW24 435 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 LINC01599Q8WXQ3 324 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 MCUR1Q96AQ8 359 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 FAF2Q96CS3 445 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 PGBD4Q96DM1 585 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 WDR83Q9BRX9 315 aaKnown RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 KLC2Q9H0B6 622 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 DHX35Q9H5Z1 703 aaKnown RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 LRRC4Q9HBW1 653 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 HMX1Q9NP08 348 aaPredicted RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 COX16Q9P0S2 106 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 SLC17A7Q9P2U7 560 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 NKX1-2Q9UD57 310 aaPredicted RBP11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 DCTN4Q9UJW0 460 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 CHMP2BQ9UQN3 213 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 HEY1Q9Y5J3 304 aa11.35□□□□□ -0.59
SH3RF1-203ENST00000508685 BCLAF3A2AJT9 711 aaKnown RBP11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 A6NHS1 94 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 H7C0C1 242 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 NRP1O14786 923 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 DLDP09622 509 aaKnown RBP11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 ODC1P11926 461 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 PRKCHP24723 683 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 ATP5OP48047 213 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 PTDSS1P48651 473 aaKnown RBP11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 SERPINB9P50453 376 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 YWHAZP63104 245 aaKnown RBP11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 FAAP100Q0VG06 881 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 TUSC3Q13454 348 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 KBTBD12Q3ZCT8 623 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 EFHC1Q5JVL4 640 aa11.34□□□□□ -0.59
SH3RF1-203ENST00000508685 SYPL2Q5VXT5 272 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms