RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 CENPCQ03188 943 aa20.58■□□□□ 0.89
SFXN1-209ENST00000508290 SLC12A1Q13621 1099 aa20.58■□□□□ 0.89
SFXN1-209ENST00000508290 LPAL2Q16609 132 aa20.58■□□□□ 0.89
SFXN1-209ENST00000508290 PLK5Q496M5 336 aa20.58■□□□□ 0.89
SFXN1-209ENST00000508290 SLC20A1Q8WUM9 679 aa20.58■□□□□ 0.89
SFXN1-209ENST00000508290 CPA5Q8WXQ8 436 aa20.58■□□□□ 0.89
SFXN1-209ENST00000508290 ACOX2Q99424 681 aa20.58■□□□□ 0.89
SFXN1-209ENST00000508290 TPSD1Q9BZJ3 242 aa20.58■□□□□ 0.89
SFXN1-209ENST00000508290 NUCKS1Q9H1E3 243 aaKnown RBP20.58■□□□□ 0.89
SFXN1-209ENST00000508290 FBRSQ9HAH7 460 aa20.58■□□□□ 0.89
SFXN1-209ENST00000508290 CACNA2D2Q9NY47 1150 aa20.58■□□□□ 0.89
SFXN1-209ENST00000508290 CLEC4EQ9ULY5 219 aa20.58■□□□□ 0.89
SFXN1-209ENST00000508290 EP300Q09472 2414 aaPredicted RBP20.57■□□□□ 0.88
SFXN1-209ENST00000508290 GPR179Q6PRD1 2367 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 ANTXRLA6NF34 631 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 PRR5-ARHGAP8B1AHC4 643 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 GOLGA6L19H0YKK7 550 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 LUC7L3O95232 432 aaKnown RBP20.57■□□□□ 0.88
SFXN1-209ENST00000508290 DLDP09622 509 aaKnown RBP20.57■□□□□ 0.88
SFXN1-209ENST00000508290 GABRG2P18507 467 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 POLR2EP19388 210 aaKnown RBP20.57■□□□□ 0.88
SFXN1-209ENST00000508290 HOXC13P31276 330 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 GSCP56915 257 aaPredicted RBP20.57■□□□□ 0.88
SFXN1-209ENST00000508290 ARHGAP8P85298 464 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 NME3Q13232 169 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 ZNF234Q14588 700 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 CSRP2Q16527 193 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 SERPINA13PQ6UXR4 307 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 SLC36A4Q6YBV0 504 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 CHST9Q7L1S5 443 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 METTL3Q86U44 580 aaKnown RBP20.57■□□□□ 0.88
SFXN1-209ENST00000508290 KBTBD6Q86V97 674 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 LGI2Q8N0V4 545 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 KDM1BQ8NB78 822 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 IQCDQ96DY2 449 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 DUSP15Q9H1R2 295 aaPredicted RBP20.57■□□□□ 0.88
SFXN1-209ENST00000508290 CD248Q9HCU0 757 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 ZDHHC4Q9NPG8 344 aa20.57■□□□□ 0.88
SFXN1-209ENST00000508290 KIAA1522Q9P206 1035 aaPredicted RBP20.57■□□□□ 0.88
SFXN1-209ENST00000508290 A0A1B0GVM2 712 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 TCAF2A6NFQ2 919 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 CALB1P05937 261 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 UNGP13051 313 aaPredicted RBP20.56■□□□□ 0.88
SFXN1-209ENST00000508290 CHRNB2P17787 502 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 WASP42768 502 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 CXCR3P49682 368 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 SULT1E1P49888 294 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 SGSHP51688 502 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 RPS24P62847 133 aaKnown RBP20.56■□□□□ 0.88
SFXN1-209ENST00000508290 PITX1P78337 314 aaPredicted RBP20.56■□□□□ 0.88
SFXN1-209ENST00000508290 FIGNQ5HY92 759 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 RAP1GAP2Q684P5 730 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 PMS2CLQ68D20 193 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 MBLAC2Q68D91 279 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 ADIPOR2Q86V24 386 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 PHF13Q86YI8 300 aaPredicted RBP20.56■□□□□ 0.88
SFXN1-209ENST00000508290 DCLK2Q8N568 766 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 PRMT1Q99873 361 aaKnown RBP20.56■□□□□ 0.88
SFXN1-209ENST00000508290 WDCPQ9H6R7 721 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 CBX8Q9HC52 389 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 STIM2Q9P246 746 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 TMEM59LQ9UK28 342 aa20.56■□□□□ 0.88
SFXN1-209ENST00000508290 SYNJ2BP-COX16A0A087WUM0 186 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 H0Y626 953 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 IL12RB1P42701 662 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 RNASE9P60153 205 aaKnown RBP20.55■□□□□ 0.88
SFXN1-209ENST00000508290 DEUP1Q05D60 604 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 CLEC16AQ2KHT3 1053 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 TMEM215Q68D42 235 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 MMS22LQ6ZRQ5 1243 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 LPCAT2Q7L5N7 544 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 KIAA2013Q8IYS2 634 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 TTC17Q96AE7 1141 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 AGPAT1Q99943 283 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 NUP58Q9BVL2 599 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 ARHGEF38Q9NXL2 777 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 COX16Q9P0S2 106 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 CALCOCO1Q9P1Z2 691 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 USP18Q9UMW8 372 aa20.55■□□□□ 0.88
SFXN1-209ENST00000508290 GOLGA8SH3BPF8 625 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 TEX33O43247 280 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 MAP3K13O43283 966 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 NDUFV2P19404 249 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 RDXP35241 583 aaKnown RBP20.54■□□□□ 0.88
SFXN1-209ENST00000508290 ST8SIA6P61647 398 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 C1QBPQ07021 282 aaKnown RBP20.54■□□□□ 0.88
SFXN1-209ENST00000508290 MAP7D1Q3KQU3 841 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 ZSCAN23Q3MJ62 389 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 FNDC3BQ53EP0 1204 aaKnown RBP20.54■□□□□ 0.88
SFXN1-209ENST00000508290 CARNMT1Q8N4J0 409 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 LMLNQ96KR4 655 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 MRGPRX1Q96LB2 322 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 C1orf74Q96LT6 269 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 RPRD1AQ96P16 312 aaPredicted RBP20.54■□□□□ 0.88
SFXN1-209ENST00000508290 VPS45Q9NRW7 570 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 SEMA4GQ9NTN9 838 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 PIGVQ9NUD9 493 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 ADAM22Q9P0K1 906 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 SUN2Q9UH99 717 aa20.54■□□□□ 0.88
SFXN1-209ENST00000508290 XPO7Q9UIA9 1087 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms