RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 GALNT2Q10471 571 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 CGB2Q6NT52 195 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 TAX1BP1Q86VP1 789 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 LRRC6Q86X45 466 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 ZNF280BQ86YH2 543 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 ZNF567Q8N184 647 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 PPM1EQ8WY54 764 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 HDAC11Q96DB2 347 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 MRRFQ96E11 262 aaKnown RBP18.18■□□□□ 0.5
SFXN1-208ENST00000507823 CFAP36Q96G28 342 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 ZCWPW1Q9H0M4 648 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 MOCS1Q9NZB8 636 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 YY1P25490 414 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 ZNF33AQ06730 810 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 AP1B1Q10567 949 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 DEFB115Q30KQ5 88 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 C10orf67Q8IYJ2 551 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 ZNF276Q8N554 614 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 EDEM1Q92611 657 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 EPAS1Q99814 870 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 PLCD4Q9BRC7 762 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 NEU3Q9UQ49 428 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 CENPFP49454 3210 aa18.18■□□□□ 0.5
SFXN1-208ENST00000507823 MTSS1O43312 755 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 HTR7P34969 479 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 ACTN3Q08043 901 aaPredicted RBP18.17■□□□□ 0.5
SFXN1-208ENST00000507823 FAAP100Q0VG06 881 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 ARTNQ5T4W7 220 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 TTC39BQ5VTQ0 682 aaPredicted RBP18.17■□□□□ 0.5
SFXN1-208ENST00000507823 CCNJLQ8IV13 435 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 URGCPQ8TCY9 931 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 RAET1EQ8TD07 263 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 SEZ6LQ9BYH1 1024 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 TKTL2Q9H0I9 626 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 ELAC1Q9H777 363 aaKnown RBP18.17■□□□□ 0.5
SFXN1-208ENST00000507823 SMYD2Q9NRG4 433 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 PHF24Q9UPV7 400 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 NR2E3Q9Y5X4 410 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 IRAK2O43187 625 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 PIAS1O75925 651 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 DHRS4L1P0CG22 281 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 MX2P20592 715 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 HOXC13P31276 330 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 GRIA1P42261 906 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 NEK3P51956 506 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 BRMS1LQ5PSV4 323 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 SPATA21Q7Z572 469 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 SPATA2LQ8IUW3 424 aaPredicted RBP18.17■□□□□ 0.5
SFXN1-208ENST00000507823 TP53INP2Q8IXH6 220 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 KLHDC8BQ8IXV7 354 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 MPP5Q8N3R9 675 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 NPWQ8N729 165 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 CREBZFQ9NS37 354 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 ABCC13Q9NSE7 274 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 MKS1Q9NXB0 559 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 STARD13Q9Y3M8 1113 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 IKBKGQ9Y6K9 419 aa18.17■□□□□ 0.5
SFXN1-208ENST00000507823 CXorf49A8MYA2 514 aaPredicted RBP18.16■□□□□ 0.5
SFXN1-208ENST00000507823 ARVCFO00192 962 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 SUN1O94901 812 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 MT-ND3P03897 115 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 ALADP13716 330 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 PTPN3P26045 913 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 RNF187Q5TA31 235 aaPredicted RBP18.16■□□□□ 0.5
SFXN1-208ENST00000507823 CNPY4Q8N129 248 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 FUBP3Q96I24 572 aaKnown RBP eCLIP18.16■□□□□ 0.5
SFXN1-208ENST00000507823 HAPLN3Q96S86 360 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 SMOC2Q9H3U7 446 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 TBC1D13Q9NVG8 400 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 TMEM161AQ9NX61 479 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 OR12D3Q9UGF7 316 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 MYO18AQ92614 2054 aaKnown RBP18.16■□□□□ 0.5
SFXN1-208ENST00000507823 LRIG2O94898 1065 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 INHAP05111 366 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 GBP2P32456 591 aaPredicted RBP18.16■□□□□ 0.5
SFXN1-208ENST00000507823 SERPINB6P35237 376 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 CCNFP41002 786 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 SLC5A3P53794 718 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 SCAMP5Q8TAC9 235 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 ARNTL2Q8WYA1 636 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 OXNAD1Q96HP4 312 aaPredicted RBP18.16■□□□□ 0.5
SFXN1-208ENST00000507823 SERAC1Q96JX3 654 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 GORASP1Q9BQQ3 440 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 NAT9Q9BTE0 207 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 RASSF4Q9H2L5 321 aa18.16■□□□□ 0.5
SFXN1-208ENST00000507823 HTTP42858 3142 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 SDR42E2A6NKP2 422 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 SYN3O14994 580 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 GSTA1P08263 222 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 PSMB4P28070 264 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 ETV4P43268 484 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 SPRED3Q2MJR0 410 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 MANEALQ5VSG8 457 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 ZNF449Q6P9G9 518 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 LVRNQ6Q4G3 990 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 SCD5Q86SK9 330 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 PDCD7Q8N8D1 485 aaKnown RBP18.15■□□□□ 0.5
SFXN1-208ENST00000507823 SLAIN1Q8ND83 568 aa18.15■□□□□ 0.5
SFXN1-208ENST00000507823 ZSCAN18Q8TBC5 510 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms